Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=22510139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 69531 AATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAG 69590 ||||| |||||| | ||||| | ||| ||| | || | ||| | || |||| || ||| Sbjct 5442252 AATGGCTATGTGCTCTTCTTCTTCCGCGAACTCTCCATGGAGTACATGAACTTTGGCAAG 5442311 Query 69591 ACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCC--ACA-TCGG 69647 | | || ||| | || | ||| |||||||| || |||| |||||| || ||| || Sbjct 5442312 GCGGTCTACTCGCGTGTGGGTCGCGTCTGCAAGAACGATCGCGGCGGTCCCTACAATC-- 5442369 Query 69648 TACTCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAA 69707 | | | | ||||| || || | ||| | |||| || || || ||||||||||| Sbjct 5442370 -ATGCCAAGAGCTGGACATCGTTCCTCAAGGCCAGACTCAACTGCTCCGTGCCCGGCGAG 5442428 Query 69708 TTCCCCTTTTACTTTGACGAA 69728 || ||||| |||||||| ||| Sbjct 5442429 TTTCCCTTCTACTTTGATGAA 5442449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408243170147216