Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 2e-31
seq4 113 2e-19
>seq1
Length=33300182
Score = 152 bits (168), Expect = 2e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||||||||| || || ||||| || || |||||||| || ||| ||||
Sbjct 5269242 ATGCAGATCTTCGTTAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTCGAACCATCG 5269301
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | ||| || ||||| || || |||||||||||||| ||||||
Sbjct 5269302 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 5269361
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||||||||| ||| | || || ||| | |||||||| | ||| || | || ||||||
Sbjct 5269362 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGTCGTACTCTGTCCGACTATAAT 5269421
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || || ||||| ||
Sbjct 5269422 ATTCAAAAGGAGTCCACCCTGCACTTGGT 5269450
>seq4
Length=26871514
Score = 113 bits (124), Expect = 2e-19
Identities = 250/372 (67%), Gaps = 6/372 (2%)
Strand=Plus/Plus
Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297
||||| || || || ||| || ||||| | || |||||| || || || ||
Sbjct 21271461 TTTGCACCCGAGGAGATTAGCTCCATGGTGTTGACCAAAATGCGTGAGACTGCCGAGGTG 21271520
Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357
||| | ||| | || | ||||| || ||||| || || || ||||||||||| |
Sbjct 21271521 TATCTGGGTGCCAAGGTGAAGGATGCGGTGATTACGGTGCCAGCCTATTTCAATGACTCG 21271580
Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417
||||| || || || |||||||| || ||||| || || ||||| || || |||||
Sbjct 21271581 CAACGTCAGGCCACCAAAGATGCGGGCTCCATTGCGGGCTTGAATGTGCTGCGCATTATC 21271640
Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477
||||| || ||||| ||||| | || ||||| || ||| || || | || ||
Sbjct 21271641 AATGAGCCAACAGCGGCTGCCTTGGCCTATGGCCT-GGACAA--GAATCTCAAAGGCGAG 21271697
Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537
||| | || |||||||||| || || || || |||| || |||| | |||
Sbjct 21271698 CGTAATGTGTTGATATTTGATTTGGGCGGCGGCACCTTTGATGTCTCCATACTCACCATT 21271757
Query 451538 GAAGATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594
|| || || | | ||||| || ||||| || |||||||| ||| | || || ||
Sbjct 21271758 GATGAGGGCTCGCTGTTTGAGGTGAAGGCCACGGCGGGTGATACGCATTTGGGTGGCGAG 21271817
Query 451595 GATATTGATAAT 451606
||| | ||||||
Sbjct 21271818 GATTTCGATAAT 21271829
Score = 111 bits (122), Expect = 6e-19
Identities = 357/550 (65%), Gaps = 12/550 (2%)
Strand=Plus/Plus
Query 450911 GTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGA 450970
||||| ||||| ||||| | || ||||| | |||||||| ||||| || ||| | ||
Sbjct 17075536 GTAGCGATTGGTATTGACTTGGGCACCACATACTCATGTGTGGGTGTCTATCAACACGGC 17075595
Query 450971 AATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT--- 451027
|| || || || || || || ||||| || || || || || || | || ||
Sbjct 17075596 AAGGTGGAGATCATTGCCAACGACCAGGGCAATCGCACAACACC--CA--GCTATGTGGC 17075651
Query 451028 -TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAAT 451084
||||| ||||| || | | | || | ||||| || | || | ||| |||
Sbjct 17075652 GTTTACAGATTCGGAGCGTTTGATTGGAGACGCTGCCAAGAACCAGGTGGCAATG--AAT 17075709
Query 451085 GCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACT 451144
||| ||||||||||| |||||| || || | |||||||| | |||||| ||| ||
Sbjct 17075710 CCCAGAAACACAGTATTTGATGCAAAGCGCCTGATTGGCCGCAAGTATGACGATCCTAAG 17075769
Query 451145 GTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTAT 451204
| | || | || || | | | || || | | || ||| ||||| |
Sbjct 17075770 ATTGCGGAGGACATCAAGCACTGGCCCTTCAAAGTGGTTAGTGAAGGAGGCAAGCCTAAG 17075829
Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264
||| | | | || || ||| || ||||| |||||||| | || |||
Sbjct 17075830 ATTGGCATCGAATTCAAGGGAGAACAGAAGCGCTTTGCACCTGAAGAGGTCAGCTCGATG 17075889
Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324
|| || || ||||| || || || ||| ||| | ||| | || || |||
Sbjct 17075890 GTGCTGGTGAAGATGAAGGAGACGGCTGAAGCGTATCTGGGTCAAAGCATCACAGACGCA 17075949
Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384
|| || || || ||||| ||||||||||| | ||| |||| |||||||| || || ||
Sbjct 17075950 GTCATCACAGTGCCCGCCTATTTCAATGACTCTCAAAGGCAGGCAACTAAGGAAGCCGGT 17076009
Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444
|| ||||| || | || ||||| |||| || || || ||||| || || || || ||
Sbjct 17076010 CACATTGCCGGGCTTAACGTTCTGAGAATCATCAACGAGCCTACTGCGGCGGCACTGGCT 17076069
Query 451445 TATGGACTAG 451454
||||||||||
Sbjct 17076070 TATGGACTAG 17076079
Score = 107 bits (118), Expect = 8e-18
Identities = 356/549 (65%), Gaps = 10/549 (2%)
Strand=Plus/Minus
Query 450911 GTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGA 450970
||||||||||| ||||| | || ||||| | |||||||| ||||| || || | ||
Sbjct 2690080 GTAGCAATTGGTATTGACTTGGGCACCACATACTCATGTGTGGGTGTCTATCAGCACGGC 2690021
Query 450971 AATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT--- 451027
|| || || || || || || || || || || || || || || | || ||
Sbjct 2690020 AAGGTGGAGATCATTGCCAACGATCAGGGCAATCGCACAACACC--CA--GCTATGTGGC 2689965
Query 451028 -TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATG 451085
||||| ||||| || | | | || | ||||| || | | | ||| |||
Sbjct 2689964 GTTTACAGATTCGGAGCGTTTGATTGGAGACGCTGCCAAGAACCA-GGTGGCGATGAATC 2689906
Query 451086 CCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTG 451145
||| ||||||||||| |||||| || || | |||||||| | |||||| ||| ||
Sbjct 2689905 CCAGAAACACAGTATTTGATGCGAAGCGCCTGATTGGCCGCAAGTATGACGATCCTAAGA 2689846
Query 451146 TACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATA 451205
| | || | || || | | | || || | | || ||| ||||| | |
Sbjct 2689845 TTGCGGAGGACATCAAGCACTGGCCCTTCAAAGTGGTTAGTGAAGGAGGCAAGCCTAAGA 2689786
Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265
|| | | | || || ||| || ||||| |||||||| | || ||||
Sbjct 2689785 TTGGCATCGAATTCAAGGGAGAACAGAAGCGCTTTGCACCTGAAGAGGTCAGCTCGATGG 2689726
Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325
| || || ||||| || || || ||| ||| | ||| | || || ||||
Sbjct 2689725 TGCTGGTGAAGATGAAGGAGACGGCTGAAGCGTATCTGGGTCAAAGCATCACAGACGCAG 2689666
Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385
| || || || ||||| ||||||||||| | ||| |||| |||||||| ||||| || |
Sbjct 2689665 TCATCACAGTGCCCGCCTATTTCAATGACTCTCAAAGGCAGGCAACTAAGGATGCCGGTC 2689606
Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445
| ||||| || | || ||||| |||| || || || ||||| || || || || || |
Sbjct 2689605 ACATTGCCGGGCTCAACGTTCTGAGAATCATCAACGAGCCTACTGCGGCGGCACTGGCTT 2689546
Query 451446 ATGGACTAG 451454
|||||||||
Sbjct 2689545 ATGGACTAG 2689537
Score = 107 bits (118), Expect = 8e-18
Identities = 356/549 (65%), Gaps = 10/549 (2%)
Strand=Plus/Plus
Query 450911 GTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGA 450970
||||||||||| ||||| | || ||||| | |||||||| ||||| || || | ||
Sbjct 2692384 GTAGCAATTGGTATTGACTTGGGCACCACATACTCATGTGTGGGTGTCTATCAGCACGGC 2692443
Query 450971 AATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT--- 451027
|| || || || || || || || || || || || || || || | || ||
Sbjct 2692444 AAGGTGGAGATCATTGCCAACGATCAGGGCAATCGCACAACACC--CA--GCTATGTGGC 2692499
Query 451028 -TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATG 451085
||||| ||||| || | | | || | ||||| || | | | ||| |||
Sbjct 2692500 GTTTACAGATTCGGAGCGTTTGATTGGAGACGCTGCCAAGAACCA-GGTGGCGATGAATC 2692558
Query 451086 CCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTG 451145
||| ||||||||||| |||||| || || | |||||||| | |||||| ||| ||
Sbjct 2692559 CCAGAAACACAGTATTTGATGCGAAGCGCCTGATTGGCCGCAAGTATGACGATCCTAAGA 2692618
Query 451146 TACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATA 451205
| | || | || || | | | || || | | || ||| ||||| | |
Sbjct 2692619 TTGCGGAGGACATCAAGCACTGGCCCTTCAAAGTGGTTAGTGAAGGAGGCAAGCCTAAGA 2692678
Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265
|| | | | || || ||| || ||||| |||||||| | || ||||
Sbjct 2692679 TTGGCATCGAATTCAAGGGAGAACAGAAGCGCTTTGCACCTGAAGAGGTCAGCTCGATGG 2692738
Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325
| || || ||||| || || || ||| ||| | ||| | || || ||||
Sbjct 2692739 TGCTGGTGAAGATGAAGGAGACGGCTGAAGCGTATCTGGGTCAAAGCATCACAGACGCAG 2692798
Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385
| || || || ||||| ||||||||||| | ||| |||| |||||||| ||||| || |
Sbjct 2692799 TCATCACAGTGCCCGCCTATTTCAATGACTCTCAAAGGCAGGCAACTAAGGATGCCGGTC 2692858
Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445
| ||||| || | || ||||| |||| || || || ||||| || || || || || |
Sbjct 2692859 ACATTGCCGGGCTCAACGTTCTGAGAATCATCAACGAGCCTACTGCGGCGGCACTGGCTT 2692918
Query 451446 ATGGACTAG 451454
|||||||||
Sbjct 2692919 ATGGACTAG 2692927
Score = 95.1 bits (104), Expect = 5e-14
Identities = 177/260 (68%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| |||||| | ||| | || | || || | ||| | || ||||| || || ||
Sbjct 23615186 GGCAAGCCCAAGATTGAGGTTACGTACAAGGATGAGAAGAAGACTTTCTTCCCCGAGGAG 23615127
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || ||||| | || || ||||| || || || || || |||| |
Sbjct 23615126 ATCTCCTCCATGGTGTTGACCAAGATGAAGGAGACCGCCGAGGCGTACCTTGGCAAGACG 23615067
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| || |||| || || ||||| |||||||||||||| || | || || || || ||
Sbjct 23615066 GTGACAAATGCCGTCATCACTGTGCCCGCTTATTTCAACGACTCGCAGCGTCAGGCGACC 23615007
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| || ||||| ||||| ||||| || || ||||| || || || || ||
Sbjct 23615006 AAAGATGCTGGTACCATTGCCGGTTTGAATGTGCTGCGTATTATCAACGAGCCCACGGCC 23614947
Query 451433 GCTGCTCTAGCATATGGACT 451452
|| ||| | || ||||| ||
Sbjct 23614946 GCGGCTATTGCCTATGGTCT 23614927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975718248116648
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