Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 6e-13 >seq1 Length=33300182 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597 |||||||||||| | || |||||||| || ||||||| ||||| || | ||| || || Sbjct 19593908 ATCCTTGCCACCTGTTAGACGTGTACCGAACTGACCACGGGGCTCTAGTAAATTAATATT 19593849 Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTCGC 167656 ||||| ||| | | | | ||||| ||||| || || || || | || || |||| Sbjct 19593848 GTTCGAGCCCACAAAGTTCTGTGCCAAATTGACAATAGTCATCTGC-AATGACACCTCGC 19593790 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCAT 167716 |||| || || ||| || || |||||| | | | | ||||| || || | |||| Sbjct 19593789 CGTGATGATAGGCAGACTGCTCTGCCACAGAGCCAGAGAGTTGTGCCACTTTAACCTCAC 19593730 Query 167717 CTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCAT 167776 |||| || | ||| || | | ||||||||||||| || ||| || || |||| Sbjct 19593729 GTTTGTCGTTACGCTTGAAGCAAGTAAACATAACCTTGCGCTGTCCAGGCTTAAGGCCAT 19593670 Query 167777 C 167777 | Sbjct 19593669 C 19593669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975955826800