Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=33300182
Score = 107 bits (118), Expect = 2e-18
Identities = 292/436 (67%), Gaps = 11/436 (3%)
Strand=Plus/Minus
Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAA-AA 168349
|| |||||||||||||||| || ||||| || ||||| ||||| | || || || ||
Sbjct 19594087 CCAGTACCGATACCTTCGGCGCCGTTCACTAGTACCATGGGTATTATGGGTATATACCAA 19594028
Query 168350 GTCTGGTTCAATTGAGC-GCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAG 168408
|| |||||||| | || | |||||||| | || || | || |||||| |
Sbjct 19594027 GTG-GGTTCAAT-GCGCTGGCCATCATCTACTTGATACGACAGCAATGGATCATCCAATG 19593970
Query 168409 GATCAAAGATCTTGCGAGCCTCTTTGGTAAGTT--TTGTGAAAATGTACCTCGTCTGAGA 168466
||| | | || || | || |||| | | | ||||| || || | | ||
Sbjct 19593969 GATGATAAATAAGACGCG--TCAATGGTGACATCATAGTGAATATATAACGAGCGCTAGC 19593912
Query 168467 AGCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAAT 168526
|||||| ||||| | ||||| ||||| || ||||||| || || || | |||||
Sbjct 19593911 GCTATCCTTGCCACCTGTTAGACGTGTACCGAACTGACCACGGGGCTCTAGTAAATTAAT 19593852
Query 168527 GTTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTG-TCCGCTAAGGATACTT 168585
||||| || ||| ||| | |||||| || ||||| || || || || || || |
Sbjct 19593851 ATTGTTCGAGCCCACAAAGTTCTGTGCCAAATTGACAATAGTCATCTGC-AATGACACCT 19593793
Query 168586 CACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTT 168645
| || || || || ||||||| || || ||| | | | ||||||||||| || | |
Sbjct 19593792 CGCCGTGATGATAGGCAGACTGCTCTGCCACAGAGCCAGAGAGTTGTGCCACTTTAACCT 19593733
Query 168646 CATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGAC 168705
|| ||| || | |||||||| | |||| || || | |||| |||||| || |
Sbjct 19593732 CACGTTTGTCGTTACGCTTGAAGCAAGTAAACATAACCTTGCGCTGTCCAGGCTTAAGGC 19593673
Query 168706 CATCCGCCATA-TGGG 168720
||||| ||||| ||||
Sbjct 19593672 CATCCACCATACTGGG 19593657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980755751440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |