Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=33300182 Score = 107 bits (118), Expect = 2e-18 Identities = 292/436 (67%), Gaps = 11/436 (3%) Strand=Plus/Minus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAA-AA 168349 || |||||||||||||||| || ||||| || ||||| ||||| | || || || || Sbjct 19594087 CCAGTACCGATACCTTCGGCGCCGTTCACTAGTACCATGGGTATTATGGGTATATACCAA 19594028 Query 168350 GTCTGGTTCAATTGAGC-GCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAG 168408 || |||||||| | || | |||||||| | || || | || |||||| | Sbjct 19594027 GTG-GGTTCAAT-GCGCTGGCCATCATCTACTTGATACGACAGCAATGGATCATCCAATG 19593970 Query 168409 GATCAAAGATCTTGCGAGCCTCTTTGGTAAGTT--TTGTGAAAATGTACCTCGTCTGAGA 168466 ||| | | || || | || |||| | | | ||||| || || | | || Sbjct 19593969 GATGATAAATAAGACGCG--TCAATGGTGACATCATAGTGAATATATAACGAGCGCTAGC 19593912 Query 168467 AGCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAAT 168526 |||||| ||||| | ||||| ||||| || ||||||| || || || | ||||| Sbjct 19593911 GCTATCCTTGCCACCTGTTAGACGTGTACCGAACTGACCACGGGGCTCTAGTAAATTAAT 19593852 Query 168527 GTTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTG-TCCGCTAAGGATACTT 168585 ||||| || ||| ||| | |||||| || ||||| || || || || || || | Sbjct 19593851 ATTGTTCGAGCCCACAAAGTTCTGTGCCAAATTGACAATAGTCATCTGC-AATGACACCT 19593793 Query 168586 CACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTT 168645 | || || || || ||||||| || || ||| | | | ||||||||||| || | | Sbjct 19593792 CGCCGTGATGATAGGCAGACTGCTCTGCCACAGAGCCAGAGAGTTGTGCCACTTTAACCT 19593733 Query 168646 CATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGAC 168705 || ||| || | |||||||| | |||| || || | |||| |||||| || | Sbjct 19593732 CACGTTTGTCGTTACGCTTGAAGCAAGTAAACATAACCTTGCGCTGTCCAGGCTTAAGGC 19593673 Query 168706 CATCCGCCATA-TGGG 168720 ||||| ||||| |||| Sbjct 19593672 CATCCACCATACTGGG 19593657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980755751440