Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 3e-17
>seq1
Length=33300182
Score = 104 bits (114), Expect = 3e-17
Identities = 177/253 (70%), Gaps = 3/253 (1%)
Strand=Plus/Plus
Query 14352 CCCA-TATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCAT 14410
|||| ||||| |||||| || |||||| |||| | || || |||| | |||||||| |
Sbjct 19593657 CCCAGTATGGTGGATGGCCTTAAGCCTGGACAGCGCAAGGTTATGTTTACTTGCTTCAAG 19593716
Query 14411 AAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCT 14470
|| ||| ||| | || ||||||||||| | | | ||| || || |||||
Sbjct 19593717 CGTAACGACAAACGTGAGGTTAAAGTGGCACAACTCTCTGGCTCTGTGGCAGAGCAGTCT 19593776
Query 14471 GCGTACCACCATGGTGAAGTATCCTTAGCGGA-CACGATTGTTAAGTTGGCAAACGACTA 14529
|| || || || || || || || || || || || ||||| || |||||| | |||
Sbjct 19593777 GCCTATCATCACGGCGAGGTGTCATT-GCAGATGACTATTGTCAATTTGGCACAGAACTT 19593835
Query 14530 CACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCAT 14589
||| || ||||| ||||| | || || || ||||||| || ||||| ||||| |
Sbjct 19593836 TGTGGGCTCGAACAATATTAATTTACTAGAGCCCCGTGGTCAGTTCGGTACACGTCTAAC 19593895
Query 14590 GGGTGGTAAGGAT 14602
||||| ||||||
Sbjct 19593896 AGGTGGCAAGGAT 19593908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569555257280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |