Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 8e-19
>seq2
Length=22510139
Score = 109 bits (120), Expect = 8e-19
Identities = 350/542 (65%), Gaps = 3/542 (1%)
Strand=Plus/Minus
Query 18153 ATAAACACG-CAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
|| |||||| |||| ||| ||| || || ||||| | || |||| || || ||
Sbjct 3319019 ATCAACACGGCAAAGTCACAGTGCAAGCCCTCATCGCGCGAGATTAGCTCATTGGAGAAG 3318960
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|| || || ||||| | || | || |||||||| || || || ||||| || | |
Sbjct 3318959 GTCAAGCCAGGCATGAGGCCACGCTTCTTTAGCCAGAAAATGGAGGCGAAGCTGCCGCTA 3318900
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331
||||| || ||||||||| ||||| || || | | || |||| || |||
Sbjct 3318899 AAGAAAATGCCCTCAACGGCGGCGAAGGCAATAATCCGCTCGCCAAAGTTGGCAGCCTTG 3318840
Query 18332 CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATA 18391
||||||| | |||||| || | | | | ||| || | || ||
Sbjct 3318839 GAGGATATCCATGATAATGCCCAGTCAGCCTTGCGCTTCACAGCCGGCATTGTTTCAATT 3318780
Query 18392 GCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451
||||| |||| || || | || || ||| | ||| || || || | || | |
Sbjct 3318779 GCATTGAACAGATAGTCACGCTGTTGGGGATCACGGACATACGTATCAATGAGCACACTA 3318720
Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511
||||| || || || | | ||||| || ||||| || | |||||| | | |||||
Sbjct 3318719 TACATCTCCGAGTGGACATTCTCCATCGCAATCTGGAATCCATAAAAGCAGCGTGCCTCT 3318660
Query 18512 GGATAT-TGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570
| ||| || | || | ||| | || |||| |||||||| || || || ||||
Sbjct 3318659 GT-TATCTGCACTTCTTGACTAAAGCGCTCAACCAGGTTCTCATTGACAATGCCATCAGA 3318601
Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTT 18630
| ||||||||||||||| |||| | ||| || || ||||| || | ||| |
Sbjct 3318600 GGCTGCGAAAAATGCCAACACATGTGAAATAAAGTGACGCTCATTGTCTGTAAGACGTTC 3318541
Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
||| ||| || || || || ||||| ||||||||| |||||||| || | ||||||
Sbjct 3318540 CCAGTCAGTCATGTCCTTAGACAGATCCACTTCTTCCACAGTCCAAAATGAGGCTTCGGC 3318481
Query 18691 CT 18692
||
Sbjct 3318480 CT 3318479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871945109600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |