Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 125 2e-23 >seq5 Length=23724088 Score = 125 bits (138), Expect = 2e-23 Identities = 186/258 (72%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| | |||||| || |||||||||||| | ||||| ||||| ||| Sbjct 1429098 TCCATAGCCTTGATCAGACGACGTTGGATATAACCAGTTTCGGCAGTTTTGACAGCCGTA 1429039 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || ||||| ||||||| |||||||| ||||| | | |||| || ||| || || Sbjct 1429038 TCGATAAGACCCTCACGACCGCCCATAGCGTGGAAATAGAACTCTGAAGG-CGTCAGTCC 1428980 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 | | | | ||| |||| || || ||||||| |||||| || |||| || ||| | Sbjct 1428979 GGCCAGATACGAGTTCTCCACAAAGCCACGCGACTCGGGACCGTAATCATC---TTTGAT 1428923 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || | ||| | || || || || ||||| || || |||||||| Sbjct 1428922 GAAATGCGGCAGCGTGCGCTTCCGGAATCCATACGGTATGCGCTTGCCCTCCACGTTCTG 1428863 Query 302811 CTGTCCCAGGCACGAAAT 302828 ||| |||| ||| | ||| Sbjct 1428862 CTGACCCACGCAAGCAAT 1428845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817486854022