Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 >seq5 Length=23724088 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 || || || ||||| ||||| || || || ||||| || || || ||||||| || ||| Sbjct 20975578 TGAGTCTGGGCGCCTAGCTCACAGCCAAAATACTTGGTTGGATAGGTGGCCGGGCGACCA 20975637 Query 34504 A--GCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTC 34561 | |||| | || | ||||| ||||||||| | || || || ||||| |||||||| | Sbjct 20975638 ATGGCGCGT--GCCACTTCGGCCATGTTGACCAGCACGGTTTTAATGCCATTGCCCTTGC 20975695 Query 34562 CTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGC 34621 | ||||||||||| || |||||||| || ||||| ||||| || | || ||| Sbjct 20975696 CCTCGACCTTGGCCTGGAGCCGCGGCATCTTATAGCGATAGAAGATATCGGTAACGCTGC 20975755 Query 34622 GGTTAACGTTCACAGTCCCCATCGTG 34647 | || || || || || ||||| || Sbjct 20975756 GATTTACATTAACGGTTGCCATCTTG 20975781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841569810958