Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=28180402 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 103859 GATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACTAC 103918 || ||||| || | |||||||||| || | | || | ||||| || || |||| |||| Sbjct 5223244 GACTGGCCGCGCAACATGAAACAGAAGCCAGTGCAGCTCGCCGAGGCGGGTTTCTTCTAC 5223303 Query 103919 ACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGGAG 103978 |||||| | |||| | | |||||| ||| | |||||| || ||||||||||| Sbjct 5223304 ACCGGCGTCGGCGATCGCGTGCGCTGCTTCAGCTGTGGCGGTGGCCTGAAGGATTGGGAC 5223363 Query 103979 CACGATGATGAGCCGTGGCAACAACACGCGCT 104010 || | || ||||| ||| | ||||| ||||| Sbjct 5223364 GACAACGACGAGCCCTGGGAGCAACATGCGCT 5223395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876770832134