Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 141 9e-29
seq5 116 4e-21
seq1 102 8e-17
>seq3
Length=28180402
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22368586 AAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22368644
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22368645 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22368704
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22368705 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22368764
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 22368765 AGTCAGGGTCTTCACGAAGATCTGCAT 22368791
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22368814 AAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22368872
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22368873 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22368932
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22368933 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22368992
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 22368993 AGTCAGGGTCTTCACGAAGATCTGCAT 22369019
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22369042 AAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22369100
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22369101 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22369160
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22369161 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22369220
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 22369221 AGTCAGGGTCTTCACGAAGATCTGCAT 22369247
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22369270 AAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22369328
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22369329 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22369388
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22369389 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22369448
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 22369449 AGTCAGGGTCTTCACGAAGATCTGCAT 22369475
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22369498 AAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22369556
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22369557 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22369616
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22369617 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22369676
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 22369677 AGTCAGGGTCTTCACGAAGATCTGCAT 22369703
Score = 141 bits (156), Expect = 9e-29
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22369726 AAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22369784
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22369785 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22369844
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22369845 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22369904
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 22369905 AGTCAGGGTCTTCACGAAGATCTGCAT 22369931
Score = 140 bits (154), Expect = 3e-28
Identities = 164/218 (75%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| || ||| | | | ||||| |
Sbjct 22369954 AAGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAA 22370012
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||
Sbjct 22370013 CTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGAT 22370072
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 22370073 CTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCC 22370132
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGGCTTATTTAT 133671
|||| || || || || |||||||||| || |||||
Sbjct 22370133 AGTCAATGTCTTCACAAAGATCTGCATGG-TTTTTTAT 22370169
>seq5
Length=23724088
Score = 116 bits (128), Expect = 4e-21
Identities = 152/208 (73%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||||| ||||| |||||||| || | || | | | ||||| ||
Sbjct 5414461 AAATGGAGGGTTGACTCCTTCTGGATATTGTAGTCAGAAAGAGTACGTCCA-TCCTCCAG 5414403
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | |||||||| || || || || ||||||||||| ||
Sbjct 5414402 CTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCCTGAAT 5414343
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| || || | |||||| || |||| ||||| ||| |||||
Sbjct 5414342 CTTGGCCTTAACGTTCTCAATGGTATCAGAGGGCTCAACCTCGAGGGTGATGGTCTTGCC 5414283
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| || || ||||| || ||||||
Sbjct 5414282 AGTCAAGGTCTTGACGAAGATTTGCATG 5414255
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || || ||||| | || | | | ||||| ||
Sbjct 5414005 AAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGAAAGAGTACGTCCA-TCCTCCAG 5413947
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | |||||||| || || || || ||||||||||| ||
Sbjct 5413946 CTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCCTGAAT 5413887
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| || || | |||||| || |||| ||||| ||| |||||
Sbjct 5413886 CTTGGCCTTAACGTTCTCAATGGTATCAGAGGGCTCAACCTCGAGGGTGATGGTCTTGCC 5413827
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| || || ||||| || ||||||
Sbjct 5413826 AGTCAAGGTCTTGACGAAGATTTGCATG 5413799
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || || ||||| | || | | | ||||| ||
Sbjct 5414233 AAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGAAAGAGTACGTCCA-TCCTCCAG 5414175
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | |||||||| || || || || ||||||||||| ||
Sbjct 5414174 CTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCCTGAAT 5414115
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||||| || || | |||||| || |||| ||||| ||| |||||
Sbjct 5414114 CTTGGCCTTAACGTTCTCAATGGTATCAGAGGGCTCAACCTCGAGGGTGATGGTCTTGCC 5414055
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| || || ||||| || ||||||
Sbjct 5414054 AGTCAAGGTCTTGACGAAGATTTGCATG 5414027
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || || ||||| | || | | | ||||| ||
Sbjct 5413777 AAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGAAAGAGTACGTCCA-TCCTCAAG 5413719
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || |||| | ||||||||||| || || || || |||||||| ||
Sbjct 5413718 CTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGAAT 5413659
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | ||||| || || | ||||| || || | ||||| || |||||
Sbjct 5413658 CTTGGCCTTGACATTCTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATTGTCTTGCC 5413599
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| | |||||| ||||||||||||||
Sbjct 5413598 AGTTAAAGTTTTGACGAAAATCTGCAT 5413572
>seq1
Length=33300182
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || || | | | || || |||||||||||
Sbjct 90688 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCA-TCTTCCAGCTGCTTGCC 90746
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | |||||||| || || || || || || ||||| |||||| |||
Sbjct 90747 GGCGAAGATCAAACGCTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTT 90806
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| | |||||| || || | ||||| ||| |||||||| || ||
Sbjct 90807 GACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGT 90866
Query 133643 TTTTACGAAAATCTGCAT 133660
||| || || || |||||
Sbjct 90867 TTTCACAAAGATTTGCAT 90884
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || || | | | || || |||||||||||
Sbjct 2542924 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCA-TCTTCCAGCTGCTTGCC 2542866
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | |||||||| || || || || || || ||||| |||||| |||
Sbjct 2542865 GGCGAAGATCAAACGCTGCTGATCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTT 2542806
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| | |||||| || || | ||||| ||| |||||||| || ||
Sbjct 2542805 GACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGT 2542746
Query 133643 TTTTACGAAAATCTGCAT 133660
||| || || || |||||
Sbjct 2542745 TTTCACAAAGATTTGCAT 2542728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420763743440
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