Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1 82.4 7e-11
>seq1
Length=33300182
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| ||||| | || || ||||| | || || || | ||||| | || |||||| ||
Sbjct 5269239 AAGATGCAGATCTTCGTTAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTCGAA-CC 5269297
Query 25232 AACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| || |||||||||| | || ||| || ||| || ||||| || || || || ||
Sbjct 5269298 ATCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGA 5269357
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
||| ||| | | || | || ||||| ||| | ||||||| | | | | | ||| ||
Sbjct 5269358 TCAACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGTCGTACTCTGTCCGACTA 5269417
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384
||||||||||| || |||||| | || || |||
Sbjct 5269418 TAATATTCAAAAGGAGTCCACCCTGCACTTGGTG 5269451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094366617920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |