Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 125 8e-24 >seq1 Length=33300182 Score = 125 bits (138), Expect = 8e-24 Identities = 180/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 146923 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGC 146982 |||||||| || || ||||| || || || || || || || | |||||| || | | Sbjct 20735080 GGCTCCACATGATTCTTATAGACATGAGCATCGCCAAGCGTATGGATAAAGTCGCCTGTC 20735021 Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 || | ||| || || ||||| | ||| ||||| || | || ||| || ||||||||| Sbjct 20735020 TTCAAGCCCGTTACATGGGCTATCATATAGGTAAGAAACGCATAGGATGCAATGTTGAAG 20734961 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCG 147102 || || ||||| |||||||| | | || || ||||| || ||||| || || | | Sbjct 20734960 GGAACTCCCAGTCCCATGTCGGCGCTGCGTTGATAAAGCTGACAGGAGAGTTCACCATTG 20734901 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG 147162 ||||| || ||||| |||| |||||| |||||||| ||||| ||| | || | Sbjct 20734900 GCCACATAGAACTGCACCAGGCAGTGGCAAGGCGGCAGTGCCATTTTGGGTATATCAATG 20734841 Query 147163 GGGTTCCAGGCCGA 147176 || |||||||| || Sbjct 20734840 GGATTCCAGGCGGA 20734827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487956238400