Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 102 1e-15 >seq5 Length=23724088 Score = 102 bits (112), Expect = 1e-15 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACG 1818128 ||| | ||||| ||||| ||||||||||||| | ||| | || |||||| Sbjct 1427614 ATGTTGAAGGGAGTCACCAGCTCGGGAAAGGTTAAATTCTGTGCAATGGAGCGCGGCACG 1427555 Query 1818129 CCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTG 1818188 ||||||| |||||| | | ||| ||||| ||||||| | ||||||| |||| Sbjct 1427554 CCCACCTGGTCAATACGCAAATTGGGATCGGGTGTGATGACAGTACGCGCGGAGAAGTCC 1427495 Query 1818189 ACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCACG 1818248 || || || ||||| | ||||| || || | |||||||||||||||| ||| || | Sbjct 1427494 ACACGTTTACCCATCAAGTTGCCACGAATGCGTCCCTCCTTGCCCTTGAGACGCGCCTTG 1427435 Query 1818249 AGGCCCTTGGTGGGCTTGCCCGAC 1818272 | | |||| ||||||||||||| Sbjct 1427434 ATGGCCTTCAAGGGCTTGCCCGAC 1427411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810621288972