Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 1e-22
>seq1
Length=33300182
Score = 122 bits (134), Expect = 1e-22
Identities = 291/430 (68%), Gaps = 10/430 (2%)
Strand=Plus/Minus
Query 168278 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAG-AA 168336
|| ||||||||||| || | |||||||| || |||||||| | | | || || || ||
Sbjct 19594087 CCAGTACCGATACCTTCGGCGCCGTTCACTAGTACCATGGGTATTATGGGTATATACCAA 19594028
Query 168337 GTCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGG 168396
|| || |||||| | | ||||| || | ||| || | ||||||||| ||
Sbjct 19594027 GTG-GGTTCAATGCGCTGGCCATCATCTACTTGATACGACAGCAATGGATCATCCAATGG 19593969
Query 168397 ATCAAAGATCTTTCGGGCATCTTTTGTGAGCT--TTGTAAAGATATACCTCGTTTGAGAC 168454
|| | | || || | || | |||| | | || || ||||| | | || |
Sbjct 19593968 ATGATAAATAAGACGCG--TCAATGGTGACATCATAGTGAATATATAACGAGCGCTAG-C 19593912
Query 168455 GC-ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGAT 168513
|| |||||| ||||| | ||||| ||||| |||||||||| ||||| || | ||| ||
Sbjct 19593911 GCTATCCTTGCCACCTGTTAGACGTGTACCGAACTGACCACGGGGCTCTAGTAAATTAAT 19593852
Query 168514 ATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTG-TCCGCGAGAGAGACTT 168572
|||||| || |||| ||| | ||||| |||||||| || || || | || || |
Sbjct 19593851 ATTGTTCGAGCCCACAAAGTTCTGTGCCAAATTGACAATAGTCATCTGCAAT-GACACCT 19593793
Query 168573 CACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCT 168632
| ||||| || || ||| || |||||| ||| | | | | || |||||||| | ||
Sbjct 19593792 CGCCGTGATGATAGGCAGACTGCTCTGCCACAGAGCCAGAGAGTTGTGCCACTTTAACCT 19593733
Query 168633 CATCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGAC 168692
|| ||| || | |||||| | ||||||||||||| || |||||| || |
Sbjct 19593732 CACGTTTGTCGTTACGCTTGAAGCAAGTAAACATAACCTTGCGCTGTCCAGGCTTAAGGC 19593673
Query 168693 CATCCGCCAT 168702
||||| ||||
Sbjct 19593672 CATCCACCAT 19593663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260756255440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |