Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4 266 1e-65
seq1 187 8e-42
seq5 158 4e-33
seq3 102 2e-16
seq2 100 9e-16
>seq4
Length=26871514
Score = 266 bits (294), Expect = 1e-65
Identities = 952/1470 (65%), Gaps = 29/1470 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||| | || || ||||| || || || || ||||| || | ||| | || |||
Sbjct 23615465 GCTGTTGGTATTGATTTGGGCACCACCTACTCTTGCGTGGGTGTGTTCCAGCATGGCAAG 23615406
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || ||||| || ||||| ||||| | || || ||||| || ||||| || ||
Sbjct 23615405 GTTGAGATCATTGCCAACGATCAGGGTAATCGTACCACACCATCCTATGTTGCCTTCACG 23615346
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| ||||||||||| |||| || || || | || || |||| |
Sbjct 23615345 GACACGGAGCGTTTGATTGGTGATGCTGCCAAGAACCAGGTGGCAATGAACCCAACCCAA 23615286
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
||| | || ||||| ||||| ||||||||| | | || || || || ||
Sbjct 23615285 ACGATCTTCGATGCCAAGCGTCTTATTGGTCGCAAATTCGAGGATTCGGCTGTGCAGTCG 23615226
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT---AAACCAATTATT 349495
|| | || || | || ||| |||||| || || |||| || || | |||
Sbjct 23615225 GACATGAAGCACTGGCCCTTTGATGTTGTC-----AG-CGTTGATGGCAAGCCCAAGATT 23615172
Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTT-TTACCCGAAGAAATTTCATCAATGGT 349554
|||||| || || | ||| || || | ||| || ||||| || || || || |||||
Sbjct 23615171 GAGGTTACGTACAAGGATGAG-AAGAAGACTTTCTTCCCCGAGGAGATCTCCTCCATGGT 23615113
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
|| || |||||||| | || || || || | || | || || || |||| ||
Sbjct 23615112 GTTGACCAAGATGAAGGAGACCGCCGAGGCGTACCTTGGCAAGACGGTGACAAATGCCGT 23615053
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|| ||||| || || ||||| || || | |||||| || || ||||||||||| |
Sbjct 23615052 CATCACTGTGCCCGCTTATTTCAACGACTCGCAGCGTCAGGCGACCAAAGATGCTGGTAC 23614993
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|||||| || || ||||| || | || || || || ||||| || || || ||||| ||
Sbjct 23614992 CATTGCCGGTTTGAATGTGCTGCGTATTATCAACGAGCCCACGGCCGCGGCTATTGCCTA 23614933
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
||| || || || | | || || ||| | || ||||| ||||| || || ||
Sbjct 23614932 TGGTCTGGACAAGAAGGCTGTTGGTGAGCGCAATGTGCTCATTTTCGATTTGGGCGGCGG 23614873
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
||| |||||||| || | || | |||| || || || || || || || | || ||
Sbjct 23614872 TACCTTTGATGTTTCCATTCTGTCGATTGATGACGGCATCTTCGAGGTCAAGTCTACGGC 23614813
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
||||| || || | ||||| || ||||| || |||||||| || | || ||||| |
Sbjct 23614812 CGGTGACACTCACTTGGGTGGTGAGGATTTCGACAATCGTCTAGTCACCCACTTTGTGCA 23614753
Query 349915 AGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATC-CTAGAGCAATGCGTCGC 349972
||||| ||||| ||||| || | ||| || | || | | ||| |||||||
Sbjct 23614752 GGAATTCAAGCG-CAAGCACAAGAAGGAT-CTGACCACAAACAAGCGTGCACTGCGTCGT 23614695
Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032
|| | ||||| || || || || |||||| | | || || | ||||| || |||
Sbjct 23614694 CTGCGCACTGCCTGCGAGCGCGCAAAGCGTACGCTCTCCTCCTCCACCCAGGCCAGCATT 23614635
Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092
|| || || ||||| || || | ||||||| | || ||||| |||||||| ||
Sbjct 23614634 GAGATCGACTCTCTGTTCGAGGGTACCGATTTCTACACCTCCATTACTCGTGCTCGTTTC 23614575
Query 350093 GAAGAATTATGTATG--GATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTATTA 350149
|| |||| || | | ||||| || | ||| || ||||| || || || || | |
Sbjct 23614574 GAGGAAT--TGAACGCTGATCTGTTCCGCAGC-ACCATGGACCCCGTCGAGAAGGCTCTG 23614518
Query 350150 AAAGATGCAAAAATGTCCAAAAATCAG--ATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207
||||| || || | || || | || | || | || | || ||||| || |
Sbjct 23614517 CGTGATGCCAAGCTG--GACAAGTCGGCCATCCACGATATTGTGCTGGTCGGTGGCTCCA 23614460
Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267
| ||||| || || || || | | | || | || |||||||| || | |
Sbjct 23614459 CTCGTATCCCTAAGGTGCAGCGTCTGTTGCAGGATCTGTTCAATGGCAAGGAGCTGAACA 23614400
Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTAT 350327
|| || ||||| ||||| ||||| || |||||||| ||||| ||||| | ||| |
Sbjct 23614399 AGTCTATCAATCCCGATGAGGCTGTCGCTTATGGTGCCGCTGTCCAGGCTGCCATTCTGC 23614340
Query 350328 CTGGAAATAAGAGTTCTA--AAATTGATGATCTATTACTACTAGATGTAACTCCACTTTC 350385
||| | | ||| | | || | | ||||| | || || ||||| || ||| | ||
Sbjct 23614339 ATGGTGACA--AGTCCCAGGAAGTGCAAGATCTGCTGCTGCTCGATGTTACCCCATTGTC 23614282
Query 350386 GCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGT 350445
| | || | || ||| |||| | || |||| || || || | || | || |
Sbjct 23614281 GTTGGGTATTGAGACTGCTGGCGGTGTGATGAGCGTGCTCATCAAGCGTAACACCACCAT 23614222
Query 350446 ACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAAT 350505
|| || || || | || || || | |||| | || ||||| || | || ||
Sbjct 23614221 TCCCACCAAGCAGACTCAGACCTTCACCACATACTCTGACAATCAACCTGGTGTGCTGAT 23614162
Query 350506 TCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTAC 350565
||| || | || || || ||||| || || || || ||| | || | |||
Sbjct 23614161 TCAGGTGTACGAGGGCGAGCGTGCCATGACCAAGGACAACAATCTGTTGGGCAAGTTTGA 23614102
Query 350566 CCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATAT 350625
|| | ||||||||| || | || || || |||||||| || | ||||||||
Sbjct 23614101 GCTTTCGGGCATTCCACCAGCACCACGCGGTGTGCCACAGATTGAGGTGACCTTCGATAT 23614042
Query 350626 TGATTCAAATGGTATTTTAAATGTTACCGC 350655
||| | || |||||| | ||||| || ||
Sbjct 23614041 CGATGCCAACGGTATTCTGAATGTCACTGC 23614012
Score = 179 bits (198), Expect = 1e-39
Identities = 623/961 (65%), Gaps = 22/961 (2%)
Strand=Plus/Plus
Query 349367 AATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CA 349424
||| | || |||||||| |||||||| ||||| | ||||| | | ||| ||| |
Sbjct 21271305 AATGCCAAGAATACGGTCTTTGATGCAAAGCGTTTGATTGGACGCAAGTTTGATGATCCG 21271364
Query 349425 AATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA 349484
|| || | | || || || |||| || |||| || || | || || | |
Sbjct 21271365 AAAATAAAGGAG--GACCTCAAGCATTGGCCCTTTAAGGTGGTC---AGCGATGGCGGCA 21271419
Query 349485 AACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTT 349544
| || | || || || || | || || |||| || | ||| |||||| || |||
Sbjct 21271420 AGCCCAAGATCGAAGTGGAGTTCAAGGGCGAACGCAAGCGCTTTGCACCCGAGGAGATTA 21271479
Query 349545 CATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAA 349604
|| ||||| || |||||| || | ||| || | ||| | |||| | || |
Sbjct 21271480 GCTCCATGGTGTTGACCAAAATGCGTGAGACTGCCGAGGTGTATCTGGGTGCCAAGGTGA 21271539
Query 349605 CTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAG 349664
||||| || ||||| || ||||||||||| ||||| | || ||| || || ||||
Sbjct 21271540 AGGATGCGGTGATTACGGTGCCAGCCTATTTCAATGACTCGCAACGTCAGGCCACCAAAG 21271599
Query 349665 ATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAG 349724
|||| ||| ||||||||| || ||||| || | || || ||||| || || || || |
Sbjct 21271600 ATGCGGGCTCCATTGCGGGCTTGAATGTGCTGCGCATTATCAATGAGCCAACAGCGGCTG 21271659
Query 349725 CAATTGCATATGGGCTTGATAAAATGAGTGACCAA---GaaaaaaaTATTCTTATTTTTG 349781
| | || ||||| || || || || | | || || ||| | | || ||||
Sbjct 21271660 CCTTGGCCTATGGCCTGGACAA---GAATCTCAAAGGCGAGCGTAATGTGTTGATATTTG 21271716
Query 349782 ATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTG 349838
|||| || || || || |||||||| || |||| || |||| ||||| | ||||
Sbjct 21271717 ATTTGGGCGGCGGCACCTTTGATGTCTCCATACTCACCATTGATGAGGGCTCGCTGTTTG 21271776
Query 349839 AAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCG 349898
| || || || || || |||||||| ||| | ||||| || ||||| ||||||||| | |
Sbjct 21271777 AGGTGAAGGCCACGGCGGGTGATACGCATTTGGGTGGCGAGGATTTCGATAATCGTTTGG 21271836
Query 349899 TTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAG--ATAATCC 349956
| || ||||| | ||||| ||||| ||||| | || | || ||| |||
Sbjct 21271837 TCAATCACTTTGTGGAGGAATTCAAGCG-CAAGC-ACAAGAGCAATCTGAGCAGCAATGT 21271894
Query 349957 TAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC 350016
| || |||| || ||| | || || ||||| || || ||||| | || || || |
Sbjct 21271895 GCGCGCCCTGCGGCGTCTACGCACCGCCTGTGAGCGCGCCAAGCGCACATTGTCCTCCAG 21271954
Query 350017 TACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTAT 350076
|| | | || | || |||||| | || ||| |||| || |||| ||| ||
Sbjct 21271955 CACGGAGGCGTCACTGGAGATTGATGCGCTGCATGAGGGCATTGACTTCTATTCGAAAAT 21272014
Query 350077 TACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGT 350136
|||| || || ||||| || | |||||||| ||| | | || || | || ||
Sbjct 21272015 CTCACGCGCACGCTTTGAGGAGCTGAACATGGATCTGTTTCGCTCGACGCTGCAGCCGGT 21272074
Query 350137 GGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGT 350196
||| | | || ||||| |||||| ||| || || | || || || | ||
Sbjct 21272075 GGAGCGTGCGCTGAACGATGCCAAAATGGACAAGAAGGTCATACACGATGTGGTGCTGGT 21272134
Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256
||||| || || || || |||||| | || | | || || || ||| |||||
Sbjct 21272135 GGGTGGCTCAACGCGCATACCAAAAATACAGCGCCTGCTGCAGGATTTCTTTGGCGGCAA 21272194
Query 350257 AGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGG 350315
| | | || | || || ||||| || || || || || ||||| ||||| || ||||
Sbjct 21272195 GCAGCTCAACTTG-TCCATCAATCCCGACGAGGCGGTGGCCTATGGCGCTGCCGTGCAGG 21272253
Query 350316 C 350316
|
Sbjct 21272254 C 21272254
>seq1
Length=33300182
Score = 187 bits (206), Expect = 8e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | || || || ||||| |||||||||||||| || ||
Sbjct 5269469 ACCACCACGGAGGCGGAGCACCAAGTGCAGGGTGGACTCCTTTTGAATATTATAGTCGGA 5269410
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || |||||||| | ||| || ||||| ||||||| |||||| ||||| |||||
Sbjct 5269409 CAGAGTACGACCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGG 5269350
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|||||||||||| |||||||| || ||||| ||||| || || | ||| |||||||| ||
Sbjct 5269349 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGATGGTTCGAC 5269290
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || ||||| || || ||||||||
Sbjct 5269289 CTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTAACGAAGATCTGCAT 5269242
Score = 131 bits (144), Expect = 5e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || | || ||||| ||||| || || || || || ||
Sbjct 90655 ATACCACCACGCAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCG 90714
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || |||||||| || || || || || ||||| | ||| |||||||| ||
Sbjct 90715 GACAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGG 90774
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|||||||| ||||| || || || || || || ||||| || || | ||||| || ||
Sbjct 90775 GGAATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCG 90834
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || | ||||| ||||| || ||||| ||||| || |||||
Sbjct 90835 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 90884
Score = 131 bits (144), Expect = 5e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || | || ||||| ||||| || || || || || ||
Sbjct 2542957 ATACCACCACGCAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCG 2542898
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || |||||||| || || || || || ||||| | ||| |||||||| ||
Sbjct 2542897 GACAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGG 2542838
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|||||||| ||||| || || || || || || ||||| || || | ||||| || ||
Sbjct 2542837 GGAATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCG 2542778
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || | ||||| ||||| || ||||| ||||| || |||||
Sbjct 2542777 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 2542728
>seq5
Length=23724088
Score = 158 bits (174), Expect = 4e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| |||||||| | | | || | || || || ||||| || || || ||||
Sbjct 5413806 TTTGCATGCCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTCTGGATGTTAT 5413747
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | || || ||||| ||||| || || |||||||| || | ||| ||||| |
Sbjct 5413746 AATCAGAAAGAGTACGTCCATCCTCAAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGGT 5413687
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || || |||||||| || || || ||||| ||||| | |||||| |
Sbjct 5413686 CTGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTCTCAATGGTATCAGAAG 5413627
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| |||||||| | || | |||||| || |||| ||||| || |||||||||||
Sbjct 5413626 GCTCAACTTCCAAGGTGATTGTCTTGCCAGTTAAAGTTTTGACGAAAATCTGCAT 5413572
Score = 131 bits (144), Expect = 5e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| |||||||| | | | || | || || || ||||| || || || ||||
Sbjct 5414034 TTTGCATGCCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTCTGGATGTTAT 5413975
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | || || ||||| || || || || ||||| || || | ||| |||||||
Sbjct 5413974 AATCAGAAAGAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGAT 5413915
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| ||||| || |||||||| || || || || || ||||| | |||||| |
Sbjct 5413914 CTGGGGGAATACCTTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCAATGGTATCAGAGG 5413855
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| || || || | ||||| || || | || || || || || |||||
Sbjct 5413854 GCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 5413800
Score = 131 bits (144), Expect = 5e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| |||||||| | | | || | || || || ||||| || || || ||||
Sbjct 5414262 TTTGCATGCCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTCTGGATGTTAT 5414203
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | || || ||||| || || || || ||||| || || | ||| |||||||
Sbjct 5414202 AATCAGAAAGAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGAT 5414143
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| ||||| || |||||||| || || || || || ||||| | |||||| |
Sbjct 5414142 CTGGGGGAATACCTTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCAATGGTATCAGAGG 5414083
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| || || || | ||||| || || | || || || || || |||||
Sbjct 5414082 GCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 5414028
Score = 131 bits (144), Expect = 5e-25
Identities = 421/642 (66%), Gaps = 21/642 (3%)
Strand=Plus/Plus
Query 349256 CGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT 349315
||||| || || ||||| || ||||| ||||| | | ||||| || ||||| || ||
Sbjct 20882483 CGTGTTGAGATCATTGCCAACGATCAGGGTAATCGTATTACGCCCTCGTACGTGGCCTTC 20882542
Query 349316 ACCGAAACTG---AGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGCTAATCC 349371
|| | || ||||| ||||||||||| | || || ||||| | || | | |||||
Sbjct 20882543 ACAGCTGATGGCGAGCGTCTGATTGGTGATGCCGCTAAGAATCA-GTTGACCACAAATCC 20882601
Query 349372 AAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACA--AATCT 349429
| | || || || || ||||| ||||| || |||||| | | ||||||| ||| |
Sbjct 20882602 AGAGAACACAGTCTTCGATGCCAAGCGTCTGATTGGTCGCGAATGGTCTGACACAAATGT 20882661
Query 349430 ACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCA 349489
|| | ||| || | |||| || | || || | |||| | || |||
Sbjct 20882662 CCAGCACGATATC---AAGTTCTTCCCCTTCAAGGTGGTCGAGAAGAA--TTCCAAGCCA 20882716
Query 349490 ATTATTGAGGTTGA-ATATAA-AGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCAT 349547
||| || || | || ||| ||| | || ||| || || || ||
Sbjct 20882717 CACATTAGCGTCGATACATCGCAGGGCGCCAAGGTC--TTCGCACCTGAGGAGATCTCCG 20882774
Query 349548 CAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTG 349607
| ||||| || | || |||||||||| || ||||| ||| | || | | ||| ||
Sbjct 20882775 CCATGGTCTTGGGCAAGATGAAGGAAACCGCCGAAGCCTATCTGGGCAAGAAAGTCACCC 20882834
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
| |||||| ||||||| || ||||| ||||| |||||||||||| ||||| || ||||
Sbjct 20882835 ACGCTGTTGTTACTGTGCCCGCCTACTTTAACGATGCCCAGCGTCAGGCAACCAAGGATG 20882894
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727
| || |||||| || | | || | | || || || ||||||||||| || || |
Sbjct 20882895 CCGGTGTCATTGCTGGTCTGCAGGTGATGCGCATCATCAACGAACCCACTGCCGCTGCCA 20882954
Query 349728 TTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786
|||| || || || || || || ||| | || || ||| | ||| | || |||||
Sbjct 20882955 TTGCTTACGGTCTGGACAAGAAGGAGGG----CGAGAAGAATGTGCTTGTGTTCGATTTG 20883010
Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846
|| || || || || ||||| || || || || |||| | || | || || ||
Sbjct 20883011 GGCGGCGGCACCTTCGATGTCTCCCTGCTGACCATTGATAACGGCGTCTTCGAGGTCGTG 20883070
Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|| || ||||| || || | || || |||||||| |||
Sbjct 20883071 GCCACCAACGGTGACACTCACTTGGGCGGTGAAGATTTCGAT 20883112
>seq3
Length=28180402
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || |||||||| || ||||| || || ||
Sbjct 22368789 CATACCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTC 22368848
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 22368849 GGACAGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 22368908
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || || || ||||| ||||| | || || ||
Sbjct 22368909 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 22368968
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || || || || || || ||||||||
Sbjct 22368969 AACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369019
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || |||||||| || ||||| || || ||
Sbjct 22369017 CATACCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTC 22369076
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 22369077 GGACAGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 22369136
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || || || ||||| ||||| | || || ||
Sbjct 22369137 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 22369196
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || || || || || || ||||||||
Sbjct 22369197 AACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369247
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || |||||||| || ||||| || || ||
Sbjct 22369245 CATACCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTC 22369304
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 22369305 GGACAGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 22369364
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || || || ||||| ||||| | || || ||
Sbjct 22369365 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 22369424
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || || || || || || ||||||||
Sbjct 22369425 AACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369475
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || |||||||| || ||||| || || ||
Sbjct 22369473 CATACCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTC 22369532
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 22369533 GGACAGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 22369592
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || || || ||||| ||||| | || || ||
Sbjct 22369593 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 22369652
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || || || || || || ||||||||
Sbjct 22369653 AACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369703
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || |||||||| || ||||| || || ||
Sbjct 22369701 CATACCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTC 22369760
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 22369761 GGACAGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 22369820
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || || || ||||| ||||| | || || ||
Sbjct 22369821 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 22369880
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || || || || || || ||||||||
Sbjct 22369881 AACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369931
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || || || ||||| || ||||| || || ||
Sbjct 22369929 CATACCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTC 22369988
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 22369989 GGACAGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 22370048
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || || || || || || || ||||| ||||| | || || ||
Sbjct 22370049 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 22370108
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || | ||| || ||||| ||||||||
Sbjct 22370109 AACCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 22370159
>seq2
Length=22510139
Score = 100 bits (110), Expect = 9e-16
Identities = 121/164 (74%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 140550 TTTTGAATAT--TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607
|||||| ||| |||| | || | || || ||| ||| | ||| || ||||| ||||
Sbjct 20419102 TTTTGAGTATAGTATAGTTGGACAGAGTACGACCAACTTGCAATTGCTTGCCAGCGAAGA 20419043
Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667
||| |||||| ||||| |||||||||||| || |||| ||| |||||||| ||||| |
Sbjct 20419042 TTAAACGTTGTTGATCTAAAGGAATTCCTTCATTGTCCTAAATCTTAGCTTTGACATTTT 20418983
Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
| || | || |||||||| || | || ||| ||||| |||
Sbjct 20418982 CGATAGTTTCCGATGGTTCGACCACGAGAATAATGGTCTTACCG 20418939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515254283514818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |