Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=33300182 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 118466 TCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCAC 118525 ||| |||||| | |||||| |||||||||||||||| |||| ||||| || || || | Sbjct 20735085 TCAATGGCTCCACATGATTCTTATAGACATGAGCATCGCCAAGCGTATGGATAAAGTCGC 20735026 Query 118526 CAG-GTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAAC-TGTAGCTGGCTAC 118583 | | | |||||| || | || || ||||| || || || |||| ||| || | Sbjct 20735025 CTGTCTTCAAGCCC-GTTACATGGGCTATCATATAGGT-AAGAAACGCATAGGATGCAAT 20734968 Query 118584 ATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTC 118643 || || ||||| ||||| |||||||| || | || || | || || ||||| || Sbjct 20734967 GTTGAAGGGAACTCCCAGTCCCATGTCGGCGCTGCGTTGATAAAGCTGACAGGAGAGTTC 20734908 Query 118644 CCCGTTTGCAACATAAAACTG 118664 || || || ||||| ||||| Sbjct 20734907 ACCATTGGCCACATAGAACTG 20734887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414476769691384