Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5214 693 0.0 seq5242 277 2e-69 seq5277 118 9e-22 seq4172 118 9e-22 seq4488 96.9 3e-15 >seq5214 Length=3698012 Score = 693 bits (768), Expect = 0.0 Identities = 1303/1900 (69%), Gaps = 45/1900 (2%) Strand=Plus/Plus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 |||| ||||| || ||||| || ||||| || || || || ||||| ||||| ||||||| Sbjct 3420199 TCTTATCCACGGTGAACTGAATCGCGTTCGCAGCTGGCTTTGTGCGCAGATAGTACATGC 3420258 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||| || || ||||| | |||||| || || ||||||| ||| || || ||| Sbjct 3420259 CGGTCTTGAGGCCAGCTTTCCAGGAGTAAAAGTGAATGGACGTCAGTTTGCCGTAGTTCG 3420318 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 || ||| | | |||||||||||||| || ||||| ||||| || ||||| |||| Sbjct 3420319 GCTCTGCCACATGAATGTTGAACGACTGACTTTGGTCGATGAACGCACCACGATCTGCGG 3420378 Query 22284 CCATATTTATCAATGTAC-GCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 |||| |||| || || || || |||||||| ||||||||||| || | | | | Sbjct 3420379 CCAT-TTTAATTGTGGACTTCACGGAGATTTCCCACACGGTCTTGTAAAGATCGCGAACC 3420437 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | || || | || || |||||| || || | || |||||| || || Sbjct 3420438 TTCTGGGGAATGGCCTCAATGTTCTGGATTGAACCCCTGCTGGAAATGATCTGGTTCTTC 3420497 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462 || |||| ||||||| | | |||| || || | | || |||| |||| ||||| Sbjct 3420498 ATATCGTCGTCCCACAAATCCAGCTCGGTTAAGTCCCTCAACAAATGATGGTTGACCACC 3420557 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 || || || ||||||| ||||| || ||||||||| | |||| | || ||||||||| Sbjct 3420558 TGGAATTCACCGGACAGAACGCGCCGGGTGTAAATGTTAGTTGTGTAGGGCTCGAAAGAT 3420617 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || ||||| |||| ||| || || || || || || ||||| || || | ||| || ||| Sbjct 3420618 TCGTTGTTGCCCATTATTTGGGCAGTGGATGCCGTGGGCATGGGTGCAACCAGCAGGGAG 3420677 Query 22583 TTTCTCAAGCCGTGCT--TTGAAATTTTACT-CTTGAGCATCGACCAGTCCCACAGATCG 22639 || || | ||||||| |||| | ||| ||| || || ||| |||||||| || Sbjct 3420678 TTCCTGACACCGTGCTGCTTGA---TGGACTCCTTCAGTTTCTGCCAATCCCACAGGTCC 3420734 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 | ||| || ||||||||||| ||||| |||| | || ||| | |||||||| Sbjct 3420735 GTGGGCTTC---TTGTCCCACATGTCGTACTGCAGAATTCCCTTGCTCACGGGGCTGCCC 3420791 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 ||||| ||||| || ||||| | | | || || || ||||| || ||||| |||||| Sbjct 3420792 TCGTAGGTTTCATAGGGACCTTCGACCTGCGCCAGCTCACAGCTGGCTTCCAAGGCGCCG 3420851 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGC 22819 || || || || ||||| || | || ||||| |||| | |||||||||| || Sbjct 3420852 TAGTAAATGGTTTCGAATATCTGCTGATTCAAAAGACCGGCTTCCTCGCTTTCGTATGGG 3420911 Query 22820 ATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 | ||||| | | | ||||| || | |||||| || || || || | ||| || | Sbjct 3420912 AATCGCATGAGAATCAGGGCGTCAGCGAAACCCTGGACACCGATGCCCACCGGACGATGC 3420971 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 ||| ||| || |||| ||| |||| ||||| | || || ||| | |||| Sbjct 3420972 CTCAAATTAGATTTCTTTGTCTCTGGCAGGGGATAAAAGTTGATGTCAATTATCTTGTTG 3421031 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 | |||||||| || | || || | | || || | ||| | | Sbjct 3421032 AGATTTCTGGTAACCGTCTTGGTGACTTCCTTCAGTTTTTTGAAATC--ATACGTCTTCT 3421089 Query 23000 TGTAC--AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057 | | || ||| |||||| ||| || || || || ||||| || || | |||||| Sbjct 3421090 CGGGCGTGACGAACATGTTGAGGGCAATGGATGCCAGGTTGCACACTGCAATCTCGTCCG 3421149 Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117 | | ||||| || |||||||| || | |||||| ||||| || ||||| | ||| Sbjct 3421150 GCGCGGAATACTCAACGATTTCGGTGCACAAATTGCTGCACTTGATGGTGCCAACATTCT 3421209 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 ||||||||| || | ||||||||||||||| | ||||||||||| |||| || || | Sbjct 3421210 GCTGGTTGCTCTTCCTGTTGCACGAATCCTTGAACAGCATGTACGGATTGCCGGTTTCCA 3421269 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC--GCACGTACCT 23235 |||||||||| ||||| || ||||| | ||| || | || |||| | || | | Sbjct 3421270 CCTGCGACTCAATGATGGCGAACCACAAGGACTGTGCCTTGAC-CGTCCGGTTCGCA-CG 3421327 Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCA 23294 ||| || | |||||| | ||||| | || || || | || | ||| ||| || Sbjct 3421328 GCCCTCCTGCTCGTATTGCGTGTACAGCTTTTCGAACTCATCGCCCCACACA-TCGTGCA 3421386 Query 23295 GGCCGGGCGATTGCATCGGACACATGAG-----ACTCCACATTGAGTCATTTTCAACGCG 23349 ||||||| ||| ||||||||| || | ||| | ||| | | || ||||| Sbjct 3421387 GGCCGGGGCATTTGTGCGGACACATCAGCGACCAGTCCCCGTTG-GCC----TCGACGCG 3421441 Query 23350 TCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTC 23409 | |||| |||||||| |||||||| || |||||||| || ||||||||||| |||||| Sbjct 3421442 TTTCATGAAAAGATCGGGTATCCAGAGGGCGTAGAAGAGATCGCGGGCGCGATTCTCCTC 3421501 Query 23410 TTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAG 23469 |||||||||||||| || | |||| || || |||||||||| ||||| ||||| || Sbjct 3421502 CTTGCCGGTGTTCTTCTTGAGTTCCAGGAACTCGAACACGTCCGAGTGCCAGGGCTCCAG 3421561 Query 23470 GTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTT 23529 ||||| ||| || || || || | ||| ||| |||||||| |||||||| ||| || Sbjct 3421562 GTAAATGGCGAAGGCACCGGGCCGCTTGCCGCCACCCTGATCCACGTAACGTGCCACATT 3421621 Query 23530 GTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT 23589 |||| | || || ||||| || || || || ||||| | || | | || | || | | Sbjct 3421622 GTTGAAGACCCTGAGCATGGGTACCAGGCCATTGGAGGTGC--CATTCGTGCCGCAGA-T 3421678 Query 23590 CGA---ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 || || || || || | | || || | | || |||||||| |||||||||| Sbjct 3421679 GGAGGTGCCCTTGGCCCGGATGCAATGGACATTCAGTCCAATGCCTCCTGCCGATTTCGA 3421738 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 ||||| ||||| |||| || | | | ||||||||||||| ||| | | | | Sbjct 3421739 GATCATGGCGCACTGTTCCACCGACTTGAAGATGCCCTCGATCGAGTCGGCCGTCATGGT 3421798 Query 23707 GACCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762 | || ||| ||||| |||| ||| || ||| || || || | || || || | Sbjct 3421799 CAGCAGGAAGCACGACGACAGTTGCGGCCGATTT----GTGGCTGCGGCAAAAAGCGTTG 3421854 Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822 | |||||| || ||| | | | ||||| || ||||| || || | ||| ||||| | Sbjct 3421855 GCGAGGCGTGGGTGAAGAACCGCTCCGACAGCAGGTTGTAGGTCTCCACGGCCGCATCGA 3421914 Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882 |||||||||| || || ||||| || |||||||||| ||||| || || | |||| | Sbjct 3421915 TGTCCTCTCCATGGATTCCGATCGCCACGCGCATCAGCATGTGCTGCGGACGCTCGGCGA 3421974 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | ||||| | || | ||| || ||||||| | |||||||| ||||| |||| | Sbjct 3421975 TCTTTCCGTTTCTCTTCAGCAGGTACGAACGTTCGAGGGTTTTAAAACCAAAGTAGTTGT 3422034 Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACG 23982 | |||||||||||| | | ||||| || ||||| || Sbjct 3422035 ACCCAAAGTCACGATCATAGATTATGGAGGAGTTCAAGCG 3422074 Score = 109 bits (120), Expect = 5e-19 Identities = 178/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 31176 GGCGAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCG 31235 || || | |||| || ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 3522951 GGTGACTGGAATACAAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTC 3523010 Query 31236 TCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAG 31295 | || || |||||||| || | | |||||| || ||| | || |||||| |||| Sbjct 3523011 TTGAGGTCGAACCGTCGGATACTATCGAAAATGTTAAAGCCAAGATTCAGGACAAAGAAG 3523070 Query 31296 GCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA 31355 | | || || || ||||||||||| || ||||||||||| ||| ||||||| | Sbjct 3523071 GAATTCCTCCAGATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCA 3523130 Query 31356 CTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGG 31415 | | || ||||||||||| || || || ||| | || |||| || | ||| | | Sbjct 3523131 CCCTCTCTGACTATAACATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCGTCTGCGTG 3523190 Query 31416 GCGGT----AGAAGCG 31427 | ||| ||||||| Sbjct 3523191 GTGGTGCCAAGAAGCG 3523206 >seq5242 Length=5320397 Score = 277 bits (306), Expect = 2e-69 Identities = 570/837 (68%), Gaps = 28/837 (3%) Strand=Plus/Minus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| || || || || |||||||| || || || || ||||| ||||| |||| ||| | Sbjct 3388514 AGGCTGAGGCCTCTTTCTGGACCGTAGAGGAGGTGGATCTGTCCAAGGACCTGACCGACT 3388455 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 || | |||||| || ||| | | || || |||||| |||| || || |||| Sbjct 3388454 GGCACCGCCTCAAGGACGACGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCG 3388395 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 | |||||||| || || || ||||| |||| || | || || || ||||| | | Sbjct 3388394 CCTCCGATGGCATCGTCAATGAGAACCTGGTGGAGCGGTTCAGCCAGGAGGTGCAGATCA 3388335 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 ||||||| | ||||| ||||| || || | ||||| || |||||||| || || |||| Sbjct 3388334 CGGAGGCCCGCTGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 3388275 Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACGTAGACTGTTC 57884 | | || ||||| || ||| | ||| || | || || ||| |||||| Sbjct 3388274 ACAGCGTGCTGATCGACACTTACATCCGGGATCCGCACCAGCGGGA---GTAC-CTGTTC 3388219 Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGG 57941 ||||| ||||| || ||||| ||| | ||| ||||| || ||| | | ||| Sbjct 3388218 AACGCCATCGAGACGATGCCGGCGGTG---AAGCGCAAGGCTGACTGGGCTCTGTCCTGG 3388162 Query 57942 ATAAAAAGCGCCA---CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAA 57998 || | ||| |||||| |||| ||| | | ||||| || |||||||| || Sbjct 3388161 ATCTC---CTCCAAGTCGGCCAATTTCGGGGAGCGCATCATCGCATTTGCCGCCGTGGAG 3388105 Query 57999 GGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATG 58058 || || ||||| |||||||| || | || || ||| ||||||| ||||| |||||| Sbjct 3388104 GGCATCTTCTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATG 3388045 Query 58059 CCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTT 58118 || || ||||| || ||||||| |||| || ||||||||||| | || ||| || Sbjct 3388044 CCGGGACTGACCTTCTCCAACGAGCTGATCTCCCGCGACGAGGGATTGCACTGTGACTTC 3387985 Query 58119 G-CGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACAT 58177 | |||| || |||| | ||| | || | ||| | || || |||||| | || || Sbjct 3387984 GCCGTG-CTGATGTTCCAGCACCTGGTGCAGCGACCCAGACGCGAGCGCATCATCGAGAT 3387926 Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 ||| ||| ||||| || || | ||||| |||| || ||||| || ||| | | Sbjct 3387925 CATCCGCGATGCGGTGCTCATTGAGCAGGAGTTCCTCACAGACGCCCTGCCTGTGAACCT 3387866 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 |||| |||||| ||| ||||||| |||||||||||||||| || || | | | Sbjct 3387865 CATCGGCATGAACTGTGACCTGATGTCCCAGTACATTGAGTTTGTGGCGGATCGCTTGCT 3387806 Query 58298 GCTCGAACTG---ATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAA 58354 | | || || |||| || || |||||||| || || ||||| | || ||| | Sbjct 3387805 GGTGGAGTTGGGCGTTGGCAAG-ATC--TACAACACCAAGAACCCGTTCAACTTCATGGA 3387749 Query 58355 TCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCA 58411 |||||||||| || |||||||| || || ||||| || || || |||| || || Sbjct 3387748 GATGATCTCGCTGGACGGCAAGACCAATTTCTTCGAGAAGAAGGTGGGCGAGTACCA 3387692 >seq5277 Length=7425378 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||||||||| || || || ||||| ||||| | || |||||||| || Sbjct 1193239 CATGCAAATCTTCGTAAAGACCCTTACCGGTAAAACCATCACTCTGGAGGTTGAACCTTC 1193298 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || | ||| ||||||||| || | || || || || Sbjct 1193299 TGATACCATTGAGAACGTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGATCA 1193358 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| || |||||||||||||| | ||| | ||| || || Sbjct 1193359 GCAGCGTCTCATCTTCGCAGGAAAACAGTTGGAAGATGGTCGCACTCTTTCCGACTACAA 1193418 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | ||| | || |||| Sbjct 1193419 CATCCAGAAGGAGTCTACCCTTCACTTGGTTCTTCGTCTGCGAGGTGGTA 1193468 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| || || ||||| || || || | || || || || || Sbjct 1194151 CATGCAAATCTTCGTGAAGACCCTAACTGGCAAGACCATTACACTGGAGGTGGAGCCATC 1194210 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | ||| ||||||||| || | || || ||||| Sbjct 1194211 TGACACCATTGAGAATGTGAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCA 1194270 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || || ||||| |||||||| ||| ||| || |||||| || Sbjct 1194271 GCAGCGTTTGATCTTTGCCGGCAAGCAGTTGGAGGACGGACGCACTCTGTCCGATTACAA 1194330 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || |||||||| ||||| |||| || Sbjct 1194331 CATCCAGAAGGAATCGACCCTTCACTTGGTGCT 1194363 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || ||||| | || |||||||| || Sbjct 1193011 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTGGAGGTTGAACCTTC 1193070 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || | || ||||||||||||| | || || || || Sbjct 1193071 TGATACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCAGATCA 1193130 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || ||||| || || |||| || || || ||||| || Sbjct 1193131 GCAGCGTCTCATTTTTGCTGGTAAGCAACTGGAGGATGGCCGTACGTTGTCGGATTACAA 1193190 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || |||||| | || |||| Sbjct 1193191 CATCCAGAAGGAGTCGACTTTGCACTTGGT 1193220 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| | || ||||| || |||||| | || ||||| || || Sbjct 1193695 CATGCAGATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCCTTGAAGTTGAGCCCTC 1193754 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || | ||| ||||||||| ||| | || || || || Sbjct 1193755 TGATACCATTGAGAATGTAAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGATCA 1193814 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || ||||| || || |||| || | ||| | ||| || || Sbjct 1193815 GCAGCGTCTCATTTTTGCTGGTAAGCAACTGGAGGATGGTCGCACTCTTTCCGACTACAA 1193874 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || || || || || ||||| |||| ||| Sbjct 1193875 CATCCAGAAGGAGTCTACCCTTCACTTGGTTCTT 1193908 >seq4172 Length=1033301 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| |||| ||||| || ||||| | || ||||| || Sbjct 907653 AATATGCAAATTTTCGTGAAGACTTTGACTGGCAAGACCATCACTTTGGAGGTTGAGCCT 907594 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | |||| | || || | || ||||||||| || | || || || Sbjct 907593 TCCGATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGAT 907534 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||| | || ||||| || || ||| |||| ||| ||| || ||||||| Sbjct 907533 CAGCAGCGTTTGATTTTCGCCGGAAAGCAGCTGGAGGACGGACGTACTTTGTCCGATTAT 907474 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||| ||||| |||| || Sbjct 907473 AACATCCAGAAGGAATCGACCCTTCACTTGGTCCT 907439 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || ||||| | || ||||| || || Sbjct 907423 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTTTGGAGGTTGAGCCTTC 907364 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | || || | || ||||||||| || | || || || || Sbjct 907363 CGATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCA 907304 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||| | || ||||| || || ||| ||||||| | | | || || |||||||| Sbjct 907303 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGA-TGGACGTACCTTGTCCGATTATA 907245 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || ||| | ||| |||| || Sbjct 907244 ACATCCAGAAGGAGTCCACTTTGCATTTGGTGCT 907211 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||||| |||||||| || ||||| | || || || || || Sbjct 906967 CATGCAGATCTTTGTCAAGACTCTCACAGGCAAGACCATCACTTTGGAGGTCGAGCCTTC 906908 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | || || | || |||||||||||| | || || || || Sbjct 906907 CGATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCA 906848 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||| | || ||||| || || ||| |||| || | | | ||| || ||| || | Sbjct 906847 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGA-TGGACGCACTCTGTCCGACTACA 906789 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || ||| | ||| |||| || Sbjct 906788 ACATCCAGAAGGAGTCCACTTTGCATTTGGTCCT 906755 >seq4488 Length=533506 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || || || ||||| || |||||| | || || || || || Sbjct 135304 CATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTC 135363 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||||||| ||| | || || || || Sbjct 135364 CGACACCATCGAGAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCAGATCA 135423 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| || | || || || || || Sbjct 135424 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCGGACTACAA 135483 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| || |||||||| || Sbjct 135484 CATCCAGAAGGAGTCGACCCTCCATCTGGTGCT 135516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445736149177680