Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_003356.1
Length=42575
Score E
Sequences producing significant alignments: (Bits) Value
seq4422 109 1e-19
seq5079 82.4 2e-11
>seq4422
Length=139152
Score = 109 bits (120), Expect = 1e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27133 ATGCCGGATATTGCCGCCGATGCAAAAGCCATTGCGTTTGGTAACTTCAAACGCGGCTAT 27192
|||||||||||||| || || | |||||||||| || || ||||| || | |||
Sbjct 124008 ATGCCGGATATTGCAGCAAGCGCTATCCCCATTGCGTTCGGCAATTTCAAGCGGGCCTAC 123949
Query 27193 ACCATCGTTGACCGCATCGGTACCCGTATCCTGCGCGATCCGTACACCAACAAACCGTTT 27252
| ||||| ||||| || || | ||| | || || ||||| ||||||||||| ||||||
Sbjct 123948 ATGATCGTGGACCGTATTGGCATCCGGACGCTTCGGGATCCCTACACCAACAAGCCGTTT 123889
Query 27253 GTGGGTTTTTATACCACCAAGCGAACCGGCGGTAT 27287
|| || ||||| ||||||| || ||||| || ||
Sbjct 123888 GTTGGGTTTTACGCCACCAAACGCACCGGTGGGAT 123854
>seq5079
Length=1084440
Score = 82.4 bits (90), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 17329 CATCATGCGTTGTTAGCTCAGTCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCACTGG 17388
||||| ||| |||||||||| ||| ||||||| ||||||||||| | |||| ||||
Sbjct 782351 CATCACGCGCCCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGCTGG 782292
Query 17389 TTCGAATCCAGTACAACGCGCCACACTTATTTTCCCTGGCT 17429
||||||||||| | ||||||| || ||||| |||||
Sbjct 782291 TTCGAATCCAGCAGGGCGCGCCA---TTCTTTTCAATGGCT 782254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136109624531826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |