Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq5277 89.7 4e-13 >seq5277 Length=7425378 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || |||||||| || |||||||||||| | ||| |||||| Sbjct 1192992 ACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCGGAAAGAGTACGGCCATCTTCA 1192933 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | || ||||| ||| | || || | ||| ||||| ||| | ||| || ||||| | Sbjct 1192932 AGCTGCTTGCCGGCAAAGATCAGTCGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGA 1192873 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || ||||| | ||| | |||| ||| || |||| |||||||| ||| Sbjct 1192872 ATCTTGGCCTTCACATTCTCAATCGTATCGGAAGGCTCGACCTCCAAAGTAATGGTCTTG 1192813 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || ||||| || || ||||| || |||||||| Sbjct 1192812 CCAGTCAAGGTCTTCACAAAGATCTGCATTTT 1192781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419559437619549