Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq4674 172 5e-38 >seq4674 Length=694708 Score = 172 bits (190), Expect = 5e-38 Identities = 217/291 (75%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 5501 ACGCCCGTGGACCCGAATCC-GCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTC 5559 ||||| ||||| |||||||| |||| |||| | ||| || || ||||| |||| Sbjct 523750 ACGCCGGTGGAGCCGAATCCTGCCT-CGCCGCGTTCGGTGTCCTCCAGTTTGTCCACGAG 523808 Query 5560 TTCCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCT 5618 |||| || || | | || ||||||||| || | ||| || || || ||||| || Sbjct 523809 CTCCAGTTCCGGATA-GAAGATGCGCTCGCAAATGAACTGGGCGATGCGATCGCCGCGCT 523867 Query 5619 TTACCTCGAAATCGTTGTGGCCGAAG--TTGAACAGCACCACGCCCACGTTGCCGCGGTA 5676 | |||||||| || || |||| ||||| ||||| ||||| | |||||||||||| Sbjct 523868 TCACCTCGAAGTCCACGT--CCGAGTGATTGAAGAGCACGACGCCGAGGTTGCCGCGGTA 523925 Query 5677 GTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCG 5736 || |||| | |||||| |||||||| |||||||||| ||| || ||||| || ||||| Sbjct 523926 ATCCTCGTCCACCACGCCGGCGCCCACATCGATGAAGTTCTTCACGGCCAGTCCAGAGCG 523985 Query 5737 GGGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787 ||||| |||||||||||| | || || |||| ||| | ||||||||| || Sbjct 523986 TGGAGCAACGCGGCCGTAGGAGCCCTCCGGAACCTGCACCTGCAGGTCGGT 524036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430025945047448