Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq4674 172 5e-38
>seq4674
Length=694708
Score = 172 bits (190), Expect = 5e-38
Identities = 217/291 (75%), Gaps = 8/291 (3%)
Strand=Plus/Plus
Query 5501 ACGCCCGTGGACCCGAATCC-GCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTC 5559
||||| ||||| |||||||| |||| |||| | ||| || || ||||| ||||
Sbjct 523750 ACGCCGGTGGAGCCGAATCCTGCCT-CGCCGCGTTCGGTGTCCTCCAGTTTGTCCACGAG 523808
Query 5560 TTCCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCT 5618
|||| || || | | || ||||||||| || | ||| || || || ||||| ||
Sbjct 523809 CTCCAGTTCCGGATA-GAAGATGCGCTCGCAAATGAACTGGGCGATGCGATCGCCGCGCT 523867
Query 5619 TTACCTCGAAATCGTTGTGGCCGAAG--TTGAACAGCACCACGCCCACGTTGCCGCGGTA 5676
| |||||||| || || |||| ||||| ||||| ||||| | ||||||||||||
Sbjct 523868 TCACCTCGAAGTCCACGT--CCGAGTGATTGAAGAGCACGACGCCGAGGTTGCCGCGGTA 523925
Query 5677 GTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCG 5736
|| |||| | |||||| |||||||| |||||||||| ||| || ||||| || |||||
Sbjct 523926 ATCCTCGTCCACCACGCCGGCGCCCACATCGATGAAGTTCTTCACGGCCAGTCCAGAGCG 523985
Query 5737 GGGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787
||||| |||||||||||| | || || |||| ||| | ||||||||| ||
Sbjct 523986 TGGAGCAACGCGGCCGTAGGAGCCCTCCGGAACCTGCACCTGCAGGTCGGT 524036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430025945047448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |