Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq4674 96.9 2e-15 >seq4674 Length=694708 Score = 96.9 bits (106), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 75003 GTGGTCCCCTCCTTTGGCAGGGCCCTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCG 75062 ||||| ||| || |||| |||| | || ||||| |||||| || || | || | Sbjct 524069 GTGGTTCCCGCCCGGGGCAAGGCCATTGTGAAGACCGACCTGCAGGTGCAGGTTCCGGAG 524010 Query 75063 GGCCTCTACGGCAGGGTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTC 75122 ||| ||||||| | || ||||| | || || |||||| |||| || || || || || Sbjct 524009 GGCTCCTACGGCCGCGTTGCTCCACGCTCTGGACTGGCCGTGAAGAACTTCATCGATGTG 523950 Query 75123 GGTGCCGGGGTGGTGGACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAA 75178 || ||||| ||||||||| || ||| | ||||||||||||||| | || || || Sbjct 523949 GGCGCCGGCGTGGTGGACGAGGATTACCGCGGCAACCTCGGCGTCGTGCTCTTCAA 523894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338742385309416