Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5075 93.3 7e-15
>seq5075
Length=1967217
Score = 93.3 bits (102), Expect = 7e-15
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||||||||||| || || ||||||||||| || ||||||||||| |||||
Sbjct 663401 CGCCAAGCGTCATCGCAAGGTGCTCCGTGATAACATCCAGGGTATCACCAAGCCGGCTAT 663342
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| || |||| ||||| || || || |||||| | ||||| ||| | || || || |
Sbjct 663341 TCGCCGATTGGCCCGTCGCGGCGGTGTAAAGCGTATTTCTGGCTTGATTTACGAGGAAAC 663282
Query 16552 TCGTGATGT 16560
||| | |||
Sbjct 663281 TCGCGGTGT 663273
Score = 80.6 bits (88), Expect = 4e-11
Identities = 91/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 16571 TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACT 16630
||||| ||| |||||||| ||| ||| || |||||||||||||| || || || |||
Sbjct 663204 TTCCTTGAGAACGTTATCCGTGACGCTGTCACGTATACCGAGCACGCCAAGCGCAAAACT 663145
Query 16631 GTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTT 16690
|| ||| ||||||| | ||||| || | || || || || |||| | || ||||||
Sbjct 663144 GTGACCGCCATGGACGTGGTCTACGCTCTCAAGCGCCAGGGACGTACCCTCTACGGTTTT 663085
Query 16691 GG 16692
||
Sbjct 663084 GG 663083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79070236227297
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |