Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq5375 127 2e-24
seq5242 84.2 2e-11
>seq5375
Length=646746
Score = 127 bits (140), Expect = 2e-24
Identities = 135/178 (76%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776
||||| || || ||||| | | | ||||||||||||||||||||||||||||| |||||
Sbjct 627759 GAGGGCAAGATGCACGGCTTCTTGCGCATGTACTGGGCCAAAAAGATTCTCGAATGGACC 627818
Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836
|| || || | |||||| ||||| | || |||||||| | ||||| || ||
Sbjct 627819 GCCACGCCGGAACTGGCGCTGGAGTACGCGATCCTGCTAAACGACAAGTACAGCCTTGAT 627878
Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATA 71894
|| |||||||| ||||| || || || ||||||||| ||| |||| | |||||||
Sbjct 627879 GGACGCGATCCCAACGGCTACGTGGGCTGCATGTGGTCCATCGGCGGCGTCCACGATA 627936
>seq5242
Length=5320397
Score = 84.2 bits (92), Expect = 2e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 119626 TGGCCGCTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT 119685
||||| | || | |||| |||||||||||| || || || ||||| |||||||| |
Sbjct 3387675 TGGCCACGCCCATGCGCTGGTACTCGCCCACCTTCTTCTCGAAGAAATTGGTCTTGCCGT 3387734
Query 119686 CAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGC 119745
| || || || | | ||| || | ||| || || |||||| | |||| | ||
Sbjct 3387735 CCAGCGAGATCATCTCCATGAAGTTGAACGGGTTCTTGGTGTTGTAGATCTTGCCAACGC 3387794
Query 119746 CCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACAT 119794
||||||| | || || ||||| ||||||||||| ||||| | | ||||
Sbjct 3387795 CCAACTCCACCAGCAAGCGATCCGCCACAAACTCAATGTACTGGGACAT 3387843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478629916772880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |