Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5214 233 5e-56
>seq5214
Length=3698012
Score = 233 bits (258), Expect = 5e-56
Identities = 1106/1735 (64%), Gaps = 49/1735 (3%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|| || |||||||| ||| | ||||| || || || || |||||| | ||| | |||
Sbjct 3421969 GAGCGTCCGCAGCACATGCTGATGCGCGTGGCGATCGGAATCCATGGAGAGGACATCGAT 3421910
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACA 363567
|| || | || || || || || || | || | ||||| |||||| |||||||
Sbjct 3421909 GCGGCCGTGGAGACCTACAACCTGCTGTCGGAGCGGTTCTTCACCCACGCCTCGCCAACG 3421850
Query 363568 ATGTACAATGCTGGAACTCGTAATC---CACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
| | ||| | | | |||| | || |||| || ||||| || || | |||
Sbjct 3421849 CTTTT---TGCCGCAGCCACAAATCGGCCGCAACTGTCGTCGTGCTTCCTGCTGACCATG 3421793
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
| || ||| || |||||||| ||||| | | | | | || || | || || ||
Sbjct 3421792 ACGGCCGACTCGATCGAGGGCATCTTCAAGTCGGTGGAACAGTGCGCCATGATCTCGAAA 3421733
Query 363685 AATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTC 363742
||||| || ||||| || || |||| | || || || || | |||
Sbjct 3421732 TCGGCAGGAGGCATTGGACTGAATG--TCCATTGCATCCGGGCCAAGGGCACCTCCATCT 3421675
Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802
||||||| || ||| ||||| ||||| |||||||| | || || ||||| |
Sbjct 3421674 GCGGCACGAATGGCACCTCCAATGGCCTGGTACCCATGCTCAGGGTCTTCAACAATGTGG 3421615
Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862
| | ||||| || |||||||| || ||||| || || || || || || || ||||
Sbjct 3421614 CACGTTACGTGGATCAGGGTGGCGGCAAGCGGCCCGGTGCCTTCGCCATTTACCTGGAGC 3421555
Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922
| || | || | || ||||| || || ||| ||| ||||| || || |||||
Sbjct 3421554 CCTGGCACTCGGACGTGTTCGAGTTCCTGGAACTCAAGAAGAACACCGGCAAGGAGGAGA 3421495
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
|| || || ||||| ||||| || || ||| | | || | ||| ||||| ||||| |
Sbjct 3421494 ATCGCGCCCGCGATCTCTTCTACGCCCTCTGGATACCCGATCTTTTCATGAAACGCGTCG 3421435
Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
|||| | | ||||| || | || || ||| |||| || || || |||||| |
Sbjct 3421434 AGGCCAACGGGGACTGGTCGCTGATGTGTCCGCACAAATGCCCCGGCCTGCACGATGTGT 3421375
Query 364043 GGGGTGACGACTATGTT--GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100
|||| || || | | ||| || ||| || || || |||||| ||
Sbjct 3421374 GGGGCGATGAGTTCGAAAAGCTGTACACGCAA--TACGAGCAGGAGGGCCGTGCGAACCG 3421317
Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160
||| | |||||| | ||||| |||||||| || |||||| | || || || |
Sbjct 3421316 GACGGTCAAGGCACAGTCCTTGTGGTTCGCCATCATTGAGTCGCAGGTGGAAACCGGCAA 3421257
Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|| || ||| ||| ||| |||||||||||| | ||| |||||||||| | |||| ||
Sbjct 3421256 TCCGTACATGCTGTTCAAGGATTCGTGCAACAGGAAGAGCAACCAGCAGAATGTTGGCAC 3421197
Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280
|| || ||||| | || ||||| || |||| || |||| || ||||||| |||
Sbjct 3421196 CATCAAGTGCAGCAATTTGTGCACCGAAATCGTTGAGTATTCCGCGCCGGACGAGATTGC 3421137
Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AGATGGTACTTTT 364335
|| || ||||| || || || || || ||| || | ||| | || | |
Sbjct 3421136 AGTGTGCAACCTGGCATCCATTGCCCTCAACATGTTCGTCACGCCCGAGAAG--ACGTAT 3421079
Query 364336 GACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATC 364395
|| | | | || | || || ||| | | ||| | |||||| ||||| | ||
Sbjct 3421078 GATTTCAAAAAACTGAAGGAAGTCACCAAGACGGTTACCAGAAATCTCAACAAGATAATT 3421019
Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATT 364455
|||| || | |||||| | || || | || |||||| || | ||||| ||| |
Sbjct 3421018 GACATCAACTTTTATCCCCTGCCAGAGACAAAGAAATCTAATTTGAGGCATCGTCCGGTG 3420959
Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGA---TGGCATTTGAT 364512
|| | ||||| ||||| ||||||||| | ||| |||| | | ||| ||
Sbjct 3420958 GGCATCGGTGTCCAGGGTTTCGCTGACGCCCT---GATTCTCATGCGATTCCCATACGAA 3420902
Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572
|| || || || | ||| || |||| || ||||| || || | | ||| ||
Sbjct 3420901 AGCGAGGAAGCCGGTCTTTTGAATCAGCAGATATTCGAAACCATTTACTACGGCGCCTTG 3420842
Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632
|| ||||| |||| | | | || || || || ||||| |||
Sbjct 3420841 GAAGCCAGCTGTGAGCTGGCGCAGGTCGAAGGTCCCTATGAAACCTACGAGGGCAGCCC- 3420783
Query 364633 CTTTCGCAGGGAAAAT-TCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691
| | ||| || || | | |||| || | ||| | | ||| | | || ||| |
Sbjct 3420782 CGTGAGCAAGGGAATTCTGCAGTACGACATGTGGGACAAGAAGCCCACGGACCTGTGGGA 3420723
Query 364692 CTGGGATACGCT--ACGT-TCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTAC 364748
||| | | || | | |||| | ||| |||| ||| | |||||||| |
Sbjct 3420722 TTGGCAGAAACTGAAGGAGTCCATC---AAGCAGCACGGTGTCAGGAACTCCCTGCTGGT 3420666
Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808
|| |||||||||||||| || ||||| || || | || |||||||| | ||||| ||
Sbjct 3420665 TGCACCCATGCCCACGGCATCCACTGCCCAAATAATGGGCAACAACGAATCTTTCGAGCC 3420606
Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868
| |||| || |||| | || || ||||| ||||| ||||| | ||| || || |
Sbjct 3420605 CTACACAACTAACATTTACACCCGGCGCGTTCTGTCCGGTGAATTCCAGGTGGTCAACCA 3420546
Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928
| | | | ||| | |||| | | |||||| ||| ||||||||| | ||
Sbjct 3420545 TCATTTGTTGAGGGACTTAACCGAGCTGGATTTGTGGGACGACGATATGAAGAACCAGAT 3420486
Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG--ATT-TCCAGAAGATCTGAAGCC 364985
||| || | ||||| | ||||||||| ||| ||| ||||||| | |
Sbjct 3420485 CATTTCCAGCAGGGGTTCAATCCAGAACATT-GAGGCCATTCCCCAGAAGGTTCG--CGA 3420429
Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC--TCATTGATATGGCGGCCGAT 365043
| ||||||| ||||| |||||||| ||| | ||| || ||| | ||||| || |||
Sbjct 3420428 TCTTTACAAGACCGTGTGGGAAATCTCC--GTGAAGTCCACAATTAAAATGGCCGCAGAT 3420371
Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCT 365101
|| ||||| || ||| || || |||||||| ||| ||||| || | |||| | ||
Sbjct 3420370 CGTGGTGCGTTCATCGACCAAAGTCAGTCGTTCAAC--ATTCATGTGGCAGAGCCGAACT 3420313
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| ||| || || ||||| || || ||| |||||| | || || ||||| ||
Sbjct 3420312 ACGGCAAACTGACGTCCATTCACTTTTACTCCTGGAAAGCTGGCCTCAAGACCGG 3420258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303262939945478
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |