Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq5214 408 5e-109
>seq5214
Length=3698012
Score = 408 bits (452), Expect = 5e-109
Identities = 1226/1874 (65%), Gaps = 34/1874 (2%)
Strand=Plus/Plus
Query 61840 CTTGTCCAATGTGAATTGAATGG-GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 61898
||| |||| ||||| ||||| | | || | || || || || || ||||||||||| |
Sbjct 3420200 CTTATCCACGGTGAACTGAATCGCGTTCGCA-GCTGGCTTTGTGCGCAGATAGTACATGC 3420258
Query 61899 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 61958
| || || || || |||| |||||| || || ||| |||||| || |||
Sbjct 3420259 CGGTCTTGAGGCCAGCTTTCCAGGAGTAAAAGTGAATGGACGTCAGTTTGCCGTAGTTCG 3420318
Query 61959 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62018
| ||||| | ||| || || | || |||||||| |||||||| || || | ||||| |
Sbjct 3420319 GCTCTGCCACATGAATGTTGAACGACTGACTTTGGTCGATGAACGCACCACGATCTGCGG 3420378
Query 62019 CCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 62077
||||||| || | | ||| | |||||||| | || || |||| |||| |
Sbjct 3420379 CCATTTTAATTGTGGACTTCACGGAGATTTCCCACACGGTCTTGTAAAGATCGCGAAC-- 3420436
Query 62078 TCTTCTGG---AAGGTTTGTAT--TCTGAATGGATCCACCATCTGCCA-TAATCCTATTC 62131
||||||| | || | || |||| || || || || ||| | | ||| |||
Sbjct 3420437 -CTTCTGGGGAATGGCCTCAATGTTCTGGATTGAACC-CCTGCTGGAAATGATCTGGTTC 3420494
Query 62132 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 62191
|| || || || | ||| || | ||||||||| | || | | ||| | || ||
Sbjct 3420495 TTCATATCGTCGTCCCACAAATCCAGCTCGGTTAAGTCCCTCAACAAATGATGGTTGACC 3420554
Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251
|| || ||||| || |||| || | ||| |||||||| ||| | || || || || | |
Sbjct 3420555 ACCTGGAATTCACCGGACAGAACGCGCCGGGTGTAAATGTTAGTTGTGTAGGGCTCGAAA 3420614
Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311
|| || || || |||| ||||| ||||| ||||| || ||||| ||||| |||| |
Sbjct 3420615 GATTCGTTGTTGCCCATTATTTGGGCAGTGGATGCCGTGGGCATGGGTGCAACCAGCAGG 3420674
Query 62312 CTATTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62370
|| || | ||||| || | |||| || || || | ||||| ||| || ||
Sbjct 3420675 GAGTTCCTGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAATCCCACAGGTC 3420733
Query 62371 CGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGATCCT 62428
|| || | | | || ||||| || || || || ||
Sbjct 3420734 CGTGGG--CTTCTTGTCCCACATGTCGTACTGCAGAATTCCCTTGCTCACGGGGCTGCCC 3420791
Query 62429 ACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCG 62488
| || || || || || ||||| || || || ||||| || || || || || |||
Sbjct 3420792 TCGTAGGTTTCATAGGGACCTTCGACCTGCGCCAGCTCACAGCTGGCTTCCAAGGCGCCG 3420851
Query 62489 TAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGA 62548
|| |||||||||||||| |||| || ||| | | |||||| ||| || ||||
Sbjct 3420852 TAGTAAATGGTTTCGAATATCTGCTGATTCAAAAGACCGGCTTCCTCGCTTTCGTATGGG 3420911
Query 62549 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62608
| | |||||| | ||||| || || || || ||||| || || | || | |||
Sbjct 3420912 AATCGCATGAGAATCAGGGCGTCAGCGAAACCCTGGACACCGATGCCCACCGGACGATGC 3420971
Query 62609 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62668
||| |||||| | | | ||||| | |||||| | || || || || || || |||
Sbjct 3420972 CTCAAATTAGATTTCTTTGTCTCTGGCAGGGGATAAAAGTTGATGTCAATTATCTTGTTG 3421031
Query 62669 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCT 62728
||||||||| || ||| || ||||||||||| |||||| | || | |||
Sbjct 3421032 AGATTTCTGGTAACCGTCTTGGTGACTTCCTTCAGTTTTTTGAAATCATA-CGTCT-TCT 3421089
Query 62729 A-----TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62783
| || |||||||| | |||| |||||||| || || || || | ||| | |
Sbjct 3421090 CGGGCGTGACGAACATGTTGAGGGCAATGGATGCCAGGTTGCACACTGCAATCTCGTCCG 3421149
Query 62784 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 62843
| | ||| | | || || ||||| | ||| || ||||||||||| || | ||| |
Sbjct 3421150 GCGCGGAATACTCAACGATTTCGGTGCACAAATTGCTGCACTTGATGGTGCCAACATTCT 3421209
Query 62844 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 62903
| || || ||||| |||| |||| |||||| | || ||| | ||| | || ||||| |
Sbjct 3421210 GCTGGTTGCTCTTCCTGTTGCACGAATCCTTGAACAGCATGTACGGATTGCCGGTTTCCA 3421269
Query 62904 TCTGAGATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCT 62961
||| || || || || || ||| | | ||| | ||||| | | | || | |
Sbjct 3421270 CCTGCGACTCAATGATGGCGAACCACAAGGACT-GTGCCTTGACCGTCCGGTTCGCACGG 3421328
Query 62962 CTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAG 63021
| | || | ||||| | || |||| ||||||||| || ||||| |||| || |||
Sbjct 3421329 CCCTCCTGCT-CGTATTGCGTGTACAGCTTTTCGAACTCATCGCCCCACACATCGTGCAG 3421387
Query 63022 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63081
|| || |||| | ||||||||||| |||||| || |||| ||| || ||||||||
Sbjct 3421388 GCCGGGGCATTTGTGCGGACACATCAGCGACCAGTCCCCGTTGGCCTCGACGCGTTTCAT 3421447
Query 63082 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63141
|| ||||| || ||||| || || || ||||| | || | || ||||| || ||
Sbjct 3421448 GAAAAGATCGGGTATCCAGAGGGCGTAGAAGAGATCGCGGGCGCGATTCTCCTCCTTGCC 3421507
Query 63142 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63201
|| ||||| || || || |||||| | | | || || ||||| || |||| ||| ||
Sbjct 3421508 GGTGTTCTTCTTGAGTTCCAGGAACTCGAACACGTCCGAGTGCCAGGGCTCCAGGTAAAT 3421567
Query 63202 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63261
||| | | || ||||| ||| || |||||||| | ||| | || || || |
Sbjct 3421568 GGCGAAGGCACCGGGCCGCTTGCCGCCACCCTGATCCACGTAACGTGCCACATTGTTGAA 3421627
Query 63262 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCC 63321
|| || | ||| || | | |||||||| || ||||| || || |||| || | ||
Sbjct 3421628 GACCCTGAGCATGGGTACCAGGCCATTGGAGGTGCCATTCGTGCCGCAGATGGAGGTGCC 3421687
Query 63322 ACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379
|||| || || | | ||| || || || || |||||| ||| ||||| |
Sbjct 3421688 CTTGGCCCGGATGCAATGGACATT--CAGTCCAATGCCTCCTGCCGATTTCGAGATCATG 3421745
Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439
||||| ||| | || | |||||||||| || || || ||||| | || ||
Sbjct 3421746 GCGCACTGTTCCACCGACTTGAAGATGCCCTCGATCGAGTCGGCCGTCATGGTCAGCAGG 3421805
Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499
|| || |||| ||| | ||| | || | || ||| | || || || |||||
Sbjct 3421806 AAGCACGACGACAGTTGCGGCCGATTTGTGGCTGCGGCAAAAAGCGTTGGCGAGGCGTGG 3421865
Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63559
|| || | || || || || ||||| ||||| | || | || || ||| | |
Sbjct 3421866 GTGAAGAACCGCTCCGACAGCAGGTTGTAGGTCTCCACGGCCGCATCGATGTCCTCTCCA 3421925
Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619
|| ||||| | || || ||||| | ||||||||| || | || ||||||| ||||
Sbjct 3421926 TGGATTCCGATCGCCACGCGCATCAGCATGTGCTGCGGACGCTCGGCGATCTTTCCGTTT 3421985
Query 63620 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679
| |||| || ||| || ||| | |||||||||||||| |||||||| ||||||
Sbjct 3421986 CTCTTCAGCAGGTACGAACGTTCGAGGGTTTTAAAACCAAAGTAGTTGTACCCAAAGTCA 3422045
Query 63680 CGTTCGTAAATAAT 63693
|| || || || ||
Sbjct 3422046 CGATCATAGATTAT 3422059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633589000148400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |