Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq4241 104 3e-17 seq5080 86.0 7e-12 >seq4241 Length=507456 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 15973 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 16032 |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 464632 GGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGGGGTTCGATCC 464691 Query 16033 CCTCTTCGCCCA 16044 |||| ||||||| Sbjct 464692 CCTCATCGCCCA 464703 >seq5080 Length=249237 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 15973 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 16032 |||| | ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct 211009 GGGCAATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGCGGTTCGATCC 211068 Query 16033 CCTCTTCGCCCA 16044 | || | ||||| Sbjct 211069 CGTCATTGCCCA 211080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567193506218400