Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq4594 98.7 1e-15
>seq4594
Length=2557182
Score = 98.7 bits (108), Expect = 1e-15
Identities = 224/336 (67%), Gaps = 11/336 (3%)
Strand=Plus/Minus
Query 127538 GGTTTGCACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCG 127597
||| ||||||| || || |||||||||||||| |||| | ||||| |||| ||| ||
Sbjct 2006700 GGTCTGCACGGATTCCATGTGCACGAGTTCGGGGACAACACCAACGGCTGCATGTCATCG 2006641
Query 127598 GGGGAACACTTCAATCCCACCGGTATGGATCACGGAGCGCCCAACGCGCTCGTTCGTCAC 127657
||| || ||||||||| ||| | ||| || || || ||| || | || |||
Sbjct 2006640 GGGCCGCATTTCAATCCCTACGGCAAGGAGCATGGCGCCCCCGCCGACGAGGACCGCCAC 2006581
Query 127658 GTTGGCGACCTGGGCAACGTGGAGGCGGCTAGCAGCAATTCTTTGAC---CGAA-GTCAA 127713
| ||||| ||||||||| | ||||| || || | || | |||| |||||
Sbjct 2006580 CTGGGCGATCTGGGCAACATTGAGGCCACTGGCGAC-------TGCCCCACGAAGGTCAA 2006528
Query 127714 CATCATCGACCACGTCATGTCTCTGTACGGACCGAACAGCGTCATCGGTAGGAGTCTGGT 127773
|||| |||| || | |||| ||| | ||||| ||||||| | | ||||
Sbjct 2006527 CATCTCCGACTCGAGGATCACGCTGTTCGGCGCCGACAGCATCATCGGACGCACCGTGGT 2006468
Query 127774 CGTGCACACGGATCGTGACGATCTCGGCCTGACCGATCATTATTTGAGCAAAACCACCGG 127833
|| ||| | ||| || ||||||||| | | || | ||||||| |||| ||
Sbjct 2006467 GGTCCACGCCGATGCCGATGATCTCGGCAAGGGTGGCCACGAGCTGAGCAAGTCCACGGG 2006408
Query 127834 CAACTCGGGCGGTCGGTTGGGGTGCGGGATCATTGG 127869
|||| | || | ||| | || ||||| |||||||
Sbjct 2006407 CAACGCCGGTGCTCGCATTGGATGCGGCGTCATTGG 2006372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537566716902840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |