Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq5051 87.8 4e-14
>seq5051
Length=1721511
Score = 87.8 bits (96), Expect = 4e-14
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402
|| |||||||| | |||| ||||| || |||||||||||||| || ||| ||
Sbjct 927944 CGGGTCTTTCCCAAGGTCACCAAGTGTACGTTCCACAAATACGGTCCCTCCGGCAATGTG 927885
Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462
| || | ||| || || ||| | || || |||| | || ||||||||||||||| |
Sbjct 927884 CAGAAGTTCGACGGTCTGTGCGTGCTGCCCCTGAACATTGTAAACGAGAAGATCTACGTG 927825
Query 3463 TTCCTCTGGTTCTGGTTC 3480
||||| ||||||||||||
Sbjct 927824 TTCCTGTGGTTCTGGTTC 927807
Score = 77.0 bits (84), Expect = 8e-11
Identities = 105/144 (73%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733
|||| |||||| | | ||| | | | ||| | | ||||||||| | || || ||
Sbjct 928612 CCGTCAAGGGCCTGCTGAAGAT-CGACCAGGTGTGCATCGACAACAATGTGTTTCGCATG 928554
Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793
|||||| || ||| ||||||||||| || || || || |||||||||| ||||| |||
Sbjct 928553 CATTACAAGGCCACGGTGATCATCCTGATTGCCTTCTCCCTGCTGGTGACCTCGCGCCAG 928494
Query 2794 TACTTCGGAAAGCTCATAGATTGC 2817
||| |||| | | ||| ||||||
Sbjct 928493 TACATCGGTGATCCCATCGATTGC 928470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479258941500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |