Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_011056.1
Length=75811
Score E
Sequences producing significant alignments: (Bits) Value
seq5078 138 5e-28
>seq5078
Length=1488007
Score = 138 bits (152), Expect = 5e-28
Identities = 433/663 (65%), Gaps = 11/663 (2%)
Strand=Plus/Minus
Query 65943 GCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCT 66002
|| || || || || |||| || | ||||| || ||||| || ||||| || ||
Sbjct 1314324 GCGCTGGGTATTGGTGGGTTGCCCCGTGGCCGTGTGGTGGAAATTTACGGGCCAGAAAGC 1314265
Query 66003 TCAGGGAAGTCAACGTTGTGC-CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAA 66061
|| || || | ||| | ||| || || || | || | || || ||| |||||||
Sbjct 1314264 TCTGGTAAAACCACGCT-TGCGCTGCATGCCATTGCAGAAGCACAAAAGCGTGGTGGCAC 1314206
Query 66062 CGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGT 66121
|| | || || ||||| ||| | | || || | || ||| ||| || ||
Sbjct 1314205 TTGTGCTTTTATTGATGCCGAGCATGCGTTGGATCCCGGTTATGCCAAAAAGCTGGGCGT 1314146
Query 66122 GGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGT 66181
|||||| || || || || | |||||||| | || || ||||| |||| || |
Sbjct 1314145 GGATGTAGATAACCTGCTGATCAGCCAGCCAGATGCGGGTGAACAGGCGTTGGAAATTGC 1314086
Query 66182 TGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCT 66241
|| ||||| || |||| || | | | || || || ||| || || ||
Sbjct 1314085 AGATACACTCGTGCGATCCGGCGCTATTGACGTTTTGGTGGTAGATAGTGTTGCAGCACT 1314026
Query 66242 GGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCG 66301
||||||||| || || || ||||| ||||| || || || || ||||| ||||| ||
Sbjct 1314025 GGTGCCGCGCGCAGAACTGGAAGGAGACATGGGCGATAGCCATGTTGGCCTTCATGCGCG 1313966
Query 66302 CCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCAC 66361
||||| ||||| |||| ||||| || || ||| | || || |||| || || |
Sbjct 1313965 TTTGATGAGCCAGGCTTTGCGTAAGCTTACGGGTACGGTGGCACGCTCCAATACTCTGAT 1313906
Query 66362 CCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAG 66419
| | |||| ||| | ||| ||| || || | || | || ||| ||
Sbjct 1313905 GATTTTCCTGAACCAGATCCGCCTGAAAATTGGTGTGATGTTTGGTAAT--CCG---GAA 1313851
Query 66420 ACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGG 66479
|| ||||| |||||||| || ||| ||||| | || |||||||||||| | ||| |
Sbjct 1313850 ACAACCACGGGTGGTAATGCCCTGAAGTTCTATTCTTCCGTGCGTATGGATATTCGCCGC 1313791
Query 66480 ATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC-GGCAACCGCACGCGCGTGAAGGTTGT 66538
|||| | ||||| ||||||| || | || || | |||||||| ||||||||
Sbjct 1313790 ATCGGGTCTATCAAGGACAAGGATGAGG-TGACAGGTAATCAGACGCGCGTAAAGGTTGT 1313732
Query 66539 CAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGG 66598
|| |||||| ||||||| || ||| |||| || ||| ||| | |||||||| ||
Sbjct 1313731 TAAAAACAAGATGGCGCCACCTTTCCGTCAGGTAGAATTTGATATCATGTACGGCGAAGG 1313672
Query 66599 CAT 66601
|||
Sbjct 1313671 CAT 1313669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242454356718668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |