Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5214 374 9e-99
>seq5214
Length=3698012
Score = 374 bits (414), Expect = 9e-99
Identities = 1046/1587 (66%), Gaps = 65/1587 (4%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| || ||||| || || |||||||| || |||| | || | |
Sbjct 3422035 TACAACTACTTTGGTTTTAAAACCCTCGAACGTTCGTACCTGCTGAAGAGAAACGGAAAG 3421976
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
| ||||||| ||||| || ||||||||||||| || ||||| || || || | |||
Sbjct 3421975 ATCGCCGAGCGTCCGCAGCACATGCTGATGCGCGTGGCGATCGGAATCCATGGAGAGGAC 3421916
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG-----ACATGCGGGACAAGAGGTAT---ACCA 93889
|| ||| ||||| | | ||| || ||| | || ||| |||
Sbjct 3421915 AT--CGA------TGCGGCCGTGGAGACCTACAACCTGCTGTCGGAGCGGTTCTTCACCC 3421864
Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949
||| | || || || || ||| | || ||| || |||| ||||| ||||
Sbjct 3421863 ACGCCTCGCCAACGCTTTTTGCCGCAGCCACAAATCGGCCGCAACTGTCGTCGTGCTTCC 3421804
Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009
|| |||| | | ||||||||| ||| || || ||| | | | | || |||||
Sbjct 3421803 TGCTGACCATGACGGCCGACTCGATCGAGGGCATCTTCAA--GTCGGTGGAACAGTGCGC 3421746
Query 94010 CC--ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGG 94067
| ||||| |||| || || || || || | | |||||| | | || |||| |||
Sbjct 3421745 CATGATCTCGAAATCGGCAGGAGGCATTGGACTGAATGTCCATTGCATCCGGGCCAAGGG 3421686
Query 94068 TTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTT 94127
||| |||| |||| || |||||||||||||| ||||| || || |||||| |||||||
Sbjct 3421685 CACCTCCATCTGCGGCACGAATGGCACCTCCAATGGCCTGGTACCCATGCTCAGGGTCTT 3421626
Query 94128 CAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGT 94187
|||||| | ||| || |||||||| |||||||| || | | || ||| | ||||| |
Sbjct 3421625 CAACAATGTGGCACGTTACGTGGATCAGGGTGGCGGCAAGCGGCCCGGTGCCTTCGCCAT 3421566
Query 94188 CTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGG 94247
|| || |||||||||||| |||||||| | ||| | || || |||||| |||
Sbjct 3421565 TTACCTGGAGCCCTGGCACTCGGACGTGTTCGAGTTCCTGGAACTCAAGAAGAACACCGG 3421506
Query 94248 CAACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304
||| || ||||| | ||| | || ||||||||||| |||||| | || || |||||
Sbjct 3421505 CAAGGA---GGAGAATCGCGCCCGCGATCTCTTCTACGCCCTCTGGATACCCGATCTTTT 3421449
Query 94305 TATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
||||||||||||||| ||| | |||| || | ||||| | |||| |||||
Sbjct 3421448 CATGAAACGCGTCGAGGCCAACGGGGACTGGTCGCTGATGTGTCCGCACAAATGCCCCGG 3421389
Query 94365 ACTGTCCGACGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG 94422
||| ||| || || | ||| | | || ||| | |||| | | ||||| | ||
Sbjct 3421388 CCTGCACGATGTGTGGGGCGAT-GAG-TTCGAAAAGCTGTACACGCAATACGAGCAGGAG 3421331
Query 94423 GGCAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTA 94479
||| || | ||| ||| | | || | ||||| ||| | ||
Sbjct 3421330 GGCCGTGCGAACCGGACGGTCA---AGGCACAGTCCTTGTGGTTCGCCATCATTGAGTCG 3421274
Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAAC 94539
|||||||| || || | || ||||| |||||||||| || |||| ||| ||||
Sbjct 3421273 CAGGTGGAAACCGGCAATCCGTACATGCTGTTCAAGGATTCGTGCAACAGGAAGAGCAAC 3421214
Query 94540 CAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACT 94599
|||||| | | || |||||| || ||| |||||||||| || || |||||| |
Sbjct 3421213 CAGCAGAATGTTGGCACCATCAAGTGCAGCAATTTGTGCACCGAAATCGTTGAGTATTCC 3421154
Query 94600 TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA 94659
| |||||||||||||| ||||| ||||||| ||||| ||| || ||||| |
Sbjct 3421153 GCGCCGGACGAGATTGCAGTGTGCAACCTGGCATCCATTGCCCTCAACATGTTCGT-CAC 3421095
Query 94660 GATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG 94719
| || | | | | || || | ||| |||| || | | | |
Sbjct 3421094 G--CCCGAGAAGACGTATGATTTCAAAAAACTGAAGGA---AGTCACC---------AAG 3421049
Query 94720 ATGGT---CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCG 94776
| ||| | || || |||| | |||| |||| ||||| || ||| | || ||| |
Sbjct 3421048 ACGGTTACCAGAAATCTCAACAAGATAATTGACATCAACTTTTATCCCCTGCCAGAGACA 3420989
Query 94777 GAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836
|||| || || ||| |||||| || | |||||||| |||||||||||||| |||||
Sbjct 3420988 AAGAAATCTAATTTGAGGCATCGTCCGGTGGGCATCGGTGTCCAGGGTTTCGCTGACGCC 3420929
Query 94837 CTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATA 94896
||| | | ||||| | || ||||| | || || | ||||||| | | |||
Sbjct 3420928 CTGATTCTCATGCGATTCCCATACGAAAGCGAGGAAGCCGGTCTTTTGAATCAGCAGATA 3420869
Query 94897 TTCGAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGG 94955
||||||| |||||| ||||| ||| | ||| | | | || || | ||| ||| |
Sbjct 3420868 TTCGAAACCATTTACTACGGCGCCTTGGAAGCCAGCTGTGAGCTGGCGCAGGTCGAA--- 3420812
Query 94956 CGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACC 95014
|| || | ||| | | || || |||| || | |||| ||| | |||| ||||
Sbjct 3420811 -GGTCCCTATGAAAC-CTACGAGGGCAGCCCCGTGAGCAAGGGAATTCTGCAGTACGACA 3420754
Query 95015 TCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTAT 95072
| |||| ||||||| ||| |||| || ||| ||| || | | | | | |
Sbjct 3420753 TGTGGGACAAGAAGCCCACGGACCTGTGGGATTGGCAGAAACTGAAGGAGTCCA--TCAA 3420696
Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132
| |||||||| | ||| | ||||| || || |||||||||||||| ||||| || ||
Sbjct 3420695 GCAGCACGGTGTCAGGAACTCCCTGCTGGTTGCACCCATGCCCACGGCATCCACTGCCCA 3420636
Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192
|| | ||||||||||| || ||||| |||| ||| | ||| | |||| | |||| ||
Sbjct 3420635 AATAATGGGCAACAACGAATCTTTCGAGCCCTACACAACTAACATTTACACCCGGCGCGT 3420576
Query 95193 GCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGG 95252
|| |||| ||||||| || ||||| | || | | ||||| | || ||||
Sbjct 3420575 TCTGTCCGGTGAATTCCAGGTGGTCAACCATCATTTGTTGAGGGACTTAACCGAGCTGGA 3420516
Query 95253 TGTGTGGGGTGACAAGGTCAAGAACCA 95279
| |||||| ||| | | ||||||||
Sbjct 3420515 TTTGTGGGACGACGATATGAAGAACCA 3420489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494689626846840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |