Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq5242 84.2 2e-11 >seq5242 Length=5320397 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 69531 AATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAG 69590 || || || ||| | ||||| | ||| || || || | ||| || |||| ||| ||| Sbjct 697921 AACGGCTACGTGCTGTTCTTCTTCCGCGAGCTGTCCATGGAGTTCATGAACTTCGGCAAG 697980 Query 69591 ACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCC--ACATCGGT 69648 || | || ||| |||| || | || ||||| || || | ||||| || ||| | Sbjct 697981 GCCGTCTACTCGCGAGTGGCCAGGGTTTGCAAGAACGACCGGGGCGGACCGTACAAC--- 698037 Query 69649 ACTCGGATAAA--TGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGA 69706 | ||| | | ||||| || || | ||| | || || || ||||||||||||||||| Sbjct 698038 -CACGGCAAGAGCTGGACCTCCTTCCTGAAGGCACGCCTTAACTGTTCGGTGCCCGGCGA 698096 Query 69707 ATTCCCCTTTTACTTTGACGAA 69728 || ||||| |||||||||||| Sbjct 698097 GTTTCCCTTCTACTTTGACGAA 698118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408216188205944