Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq601 102 6e-16 >seq601 Length=1931879 Score = 102 bits (112), Expect = 6e-16 Identities = 446/703 (63%), Gaps = 2/703 (0%) Strand=Plus/Plus Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 || || ||||| || || ||||| |||||||||| | || | ||| | || | | Sbjct 902798 GTGACTAGACGGTTGTCGAAATCCTCACCTCCCAGATGGGTGTCTCCGGCAGTGGACTTG 902857 Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 || | ||| | ||||| || | |||| | | ||||| ||| || ||||||| | Sbjct 902858 ACCTCGAAGATACCATCATCGATCGACAGGATGGACACATCGAAGGTGCCGCCACCCAGA 902917 Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 518191 || || || || || || ||| | || || || ||||| || || | ||| Sbjct 902918 TCGAAGATGAGCACGTTGCGCTCTCCAACGGCCTTCTTGTCCAGACCGTAAGCGATGGCA 902977 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 || || || || || || || || | || ||||| ||||| ||||| | || || || Sbjct 902978 GCGGCCGTGGGCTCGTTGATGATGCGCAGCACATTCAGACCGGCAATGGTACCGGCGTCC 903037 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 || || || || | || || ||||| || || || || || || || || || | || Sbjct 903038 TTGGTCGCCTGACGCTGCGAGTCGTTGAAGTAGGCCGGCACGGTGATGACAGCGTTGGTC 903097 Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371 || || || | ||| || || || | ||||| || | | | ||| || || Sbjct 903098 ACAGTCTTGCCCAGATAGGCCTCGGCGGTCTCCTTCATCTTGGTGAGCACCATCGAGGAG 903157 Query 518372 ATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 518430 || | || |||||| | | ||| || | | || | || || | | || || Sbjct 903158 ATCTCCTC-GGGGAAGAAGGTCTTCTTCTCGTCCTTGTAGGTCACCTCGATCTTGGGCTT 903216 Query 518431 ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTC 518490 || | | | || | || ||||||| ||||| || || || ||| ||| Sbjct 903217 GCCGTCAGCGCTGACCACCTCGAAGGGCCAGTGCTTCATGTCAGACTGGACAGCGGAGTC 903276 Query 518491 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 | || | | ||||| | || || || || || || || | ||| || || || || Sbjct 903277 CTCGAACTTGCGGCCAATCAGGCGCTTGGCGTCGAAGATCGTCTGGGTCGGGTTCATCGC 903336 Query 518551 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 518610 | || | ||||| || || || |||||| | || || || || || | |||||| || Sbjct 903337 CACCTGGTTCTTGGCGGCGTCGCCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGA 903396 Query 518611 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 518670 |||||| || |||||||| || || || || || || || || || |||| || | || Sbjct 903397 TGGAGTGGTACGATTACCCTGGTCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACAC 903456 Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 || || || | || || || ||||||||||||| |||| Sbjct 903457 GCCCACGCACGAGTAGGTGGTGCCCAAATCAATACCAACAGCA 903499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780552995136874