Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq601 102 6e-16
>seq601
Length=1931879
Score = 102 bits (112), Expect = 6e-16
Identities = 446/703 (63%), Gaps = 2/703 (0%)
Strand=Plus/Plus
Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071
|| || ||||| || || ||||| |||||||||| | || | ||| | || | |
Sbjct 902798 GTGACTAGACGGTTGTCGAAATCCTCACCTCCCAGATGGGTGTCTCCGGCAGTGGACTTG 902857
Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131
|| | ||| | ||||| || | |||| | | ||||| ||| || ||||||| |
Sbjct 902858 ACCTCGAAGATACCATCATCGATCGACAGGATGGACACATCGAAGGTGCCGCCACCCAGA 902917
Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 518191
|| || || || || || ||| | || || || ||||| || || | |||
Sbjct 902918 TCGAAGATGAGCACGTTGCGCTCTCCAACGGCCTTCTTGTCCAGACCGTAAGCGATGGCA 902977
Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251
|| || || || || || || || | || ||||| ||||| ||||| | || || ||
Sbjct 902978 GCGGCCGTGGGCTCGTTGATGATGCGCAGCACATTCAGACCGGCAATGGTACCGGCGTCC 903037
Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311
|| || || || | || || ||||| || || || || || || || || || | ||
Sbjct 903038 TTGGTCGCCTGACGCTGCGAGTCGTTGAAGTAGGCCGGCACGGTGATGACAGCGTTGGTC 903097
Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371
|| || || | ||| || || || | ||||| || | | | ||| || ||
Sbjct 903098 ACAGTCTTGCCCAGATAGGCCTCGGCGGTCTCCTTCATCTTGGTGAGCACCATCGAGGAG 903157
Query 518372 ATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 518430
|| | || |||||| | | ||| || | | || | || || | | || ||
Sbjct 903158 ATCTCCTC-GGGGAAGAAGGTCTTCTTCTCGTCCTTGTAGGTCACCTCGATCTTGGGCTT 903216
Query 518431 ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTC 518490
|| | | | || | || ||||||| ||||| || || || ||| |||
Sbjct 903217 GCCGTCAGCGCTGACCACCTCGAAGGGCCAGTGCTTCATGTCAGACTGGACAGCGGAGTC 903276
Query 518491 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550
| || | | ||||| | || || || || || || || | ||| || || || ||
Sbjct 903277 CTCGAACTTGCGGCCAATCAGGCGCTTGGCGTCGAAGATCGTCTGGGTCGGGTTCATCGC 903336
Query 518551 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 518610
| || | ||||| || || || |||||| | || || || || || | |||||| ||
Sbjct 903337 CACCTGGTTCTTGGCGGCGTCGCCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGA 903396
Query 518611 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 518670
|||||| || |||||||| || || || || || || || || || |||| || | ||
Sbjct 903397 TGGAGTGGTACGATTACCCTGGTCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACAC 903456
Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713
|| || || | || || || ||||||||||||| ||||
Sbjct 903457 GCCCACGCACGAGTAGGTGGTGCCCAAATCAATACCAACAGCA 903499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780552995136874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |