Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5074 104 3e-17 >seq5074 Length=4358836 Score = 104 bits (114), Expect = 3e-17 Identities = 251/372 (67%), Gaps = 20/372 (5%) Strand=Plus/Minus Query 169182 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 169241 |||||||||||||| ||||| || | ||| ||||||||| ||||| || | || ||| Sbjct 3523898 AGACCCTTGATGTGGGAACCGTCCTGATCCTGATCTGTCATGATCATCAGTCTGCCGTAG 3523839 Query 169242 CGAAGT----TCAGAAACATCTTGGTAGT----CTTTTCCTTGT--TGAAGACCCAA-GA 169290 || ||| ||||| |||||| || | ||| | |||| || | |||||| || Sbjct 3523838 CGCAGTGTCTTCAGAT-CATCTTCGTTGAGATACTTCTTTTTGTACTGCA-ACCCAATGA 3523781 Query 169291 TCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGA 169350 |||| | | ||||| ||| || | || || | ||| ||||| | Sbjct 3523780 TCTTGCACAAGTTGTTGATCTCGGCATTCTCCGACAGTTGCTTAAAGTTAGCCTCGCGCA 3523721 Query 169351 CATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGA 169410 |||| | || || | || || || || |||||| || || || | |||| | Sbjct 3523720 CATTGAGAAGTTTACCCCTTAGCGGGAATACTCCATAGAAATTTCGACCGATGACGCCCA 3523661 Query 169411 GACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT-- 169468 ||| | |||||| | | || |||||||| ||||| |||| ||||||||||| || Sbjct 3523660 AACCAGAGACCGCCAAAGACTTGGCTGAATCTCCCTCAGTGAGGATGAGGGTACAGTTGA 3523601 Query 169469 TCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTT 169528 || || || ||| ||| |||| ||| ||||| |||| ||||||||| || ||||||| Sbjct 3523600 TCGAGTTTTTGCC--ACCGGCCTCGTTAGCGTCCTCCAGCTTGGGAATGCCCTTAATTTT 3523543 Query 169529 G---GACTTGCG 169537 | |||||||| Sbjct 3523542 GCTCGACTTGCG 3523531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589940762427960