Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5074 104 3e-17
>seq5074
Length=4358836
Score = 104 bits (114), Expect = 3e-17
Identities = 251/372 (67%), Gaps = 20/372 (5%)
Strand=Plus/Minus
Query 169182 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 169241
|||||||||||||| ||||| || | ||| ||||||||| ||||| || | || |||
Sbjct 3523898 AGACCCTTGATGTGGGAACCGTCCTGATCCTGATCTGTCATGATCATCAGTCTGCCGTAG 3523839
Query 169242 CGAAGT----TCAGAAACATCTTGGTAGT----CTTTTCCTTGT--TGAAGACCCAA-GA 169290
|| ||| ||||| |||||| || | ||| | |||| || | |||||| ||
Sbjct 3523838 CGCAGTGTCTTCAGAT-CATCTTCGTTGAGATACTTCTTTTTGTACTGCA-ACCCAATGA 3523781
Query 169291 TCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGA 169350
|||| | | ||||| ||| || | || || | ||| ||||| |
Sbjct 3523780 TCTTGCACAAGTTGTTGATCTCGGCATTCTCCGACAGTTGCTTAAAGTTAGCCTCGCGCA 3523721
Query 169351 CATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGA 169410
|||| | || || | || || || || |||||| || || || | |||| |
Sbjct 3523720 CATTGAGAAGTTTACCCCTTAGCGGGAATACTCCATAGAAATTTCGACCGATGACGCCCA 3523661
Query 169411 GACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT-- 169468
||| | |||||| | | || |||||||| ||||| |||| ||||||||||| ||
Sbjct 3523660 AACCAGAGACCGCCAAAGACTTGGCTGAATCTCCCTCAGTGAGGATGAGGGTACAGTTGA 3523601
Query 169469 TCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTT 169528
|| || || ||| ||| |||| ||| ||||| |||| ||||||||| || |||||||
Sbjct 3523600 TCGAGTTTTTGCC--ACCGGCCTCGTTAGCGTCCTCCAGCTTGGGAATGCCCTTAATTTT 3523543
Query 169529 G---GACTTGCG 169537
| ||||||||
Sbjct 3523542 GCTCGACTTGCG 3523531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589940762427960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |