Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq4241 105 8e-18
seq5078 89.7 6e-13
seq4086 89.7 6e-13
seq4085 89.7 6e-13
seq5080 87.8 2e-12
>seq4241
Length=507456
Score = 105 bits (116), Expect = 8e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 17789 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 17848
|||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 464632 GGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGGGGTTCGATCC 464691
Query 17849 CCTCTTCGCCCAC 17861
|||| ||||||||
Sbjct 464692 CCTCATCGCCCAC 464704
>seq5078
Length=1488007
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 22401 TGCCCTTATAGCTCAGTGGTAGAGCAACGCTTTTGTAAAGCGTAGGTCGTTGGTTCAAAT 22460
|||||||||||||||||||||||||||| |||||| ||||||||| |||||||||
Sbjct 1444901 TGCCCTTATAGCTCAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTGGGTTCAAAT 1444842
Query 22461 CCGACTGGGGGC 22472
|| |||||||||
Sbjct 1444841 CCTACTGGGGGC 1444830
>seq4086
Length=80244
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 22401 TGCCCTTATAGCTCAGTGGTAGAGCAACGCTTTTGTAAAGCGTAGGTCGTTGGTTCAAAT 22460
|||||||||||||||||||||||||||| |||||| ||||||||| |||||||||
Sbjct 24820 TGCCCTTATAGCTCAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTGGGTTCAAAT 24761
Query 22461 CCGACTGGGGGC 22472
|| |||||||||
Sbjct 24760 CCTACTGGGGGC 24749
>seq4085
Length=47143
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 22401 TGCCCTTATAGCTCAGTGGTAGAGCAACGCTTTTGTAAAGCGTAGGTCGTTGGTTCAAAT 22460
|||||||||||||||||||||||||||| |||||| ||||||||| |||||||||
Sbjct 41278 TGCCCTTATAGCTCAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTGGGTTCAAAT 41219
Query 22461 CCGACTGGGGGC 22472
|| |||||||||
Sbjct 41218 CCTACTGGGGGC 41207
>seq5080
Length=249237
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 17789 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 17848
|||| | ||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct 211009 GGGCAATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGCGGTTCGATCC 211068
Query 17849 CCTCTTCGCCCAC 17861
| || | ||||||
Sbjct 211069 CGTCATTGCCCAC 211081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560569955739600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |