Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq5277 100 2e-15
>seq5277
Length=7425378
Score = 100 bits (110), Expect = 2e-15
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
||||| || || | ||||||||| || || || ||||| || | ||||| |
Sbjct 1193457 AGACGAAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGA 1193398
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| | |||||||| || || || || | |||||||| ||||||||||| ||
Sbjct 1193397 CCATCTTCCAACTGTTTTCCTGCGAAGATGAGACGCTGCTGATCTGGAGGAATTCCCTCC 1193338
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436
|| || |||||||| || || |||||| ||||||| | | || |||||
Sbjct 1193337 TTGTCCTGAATTTTAGCCTTCACGTTCTCAATGGTATCAGAAGGTTCAACCTCCAGAGTG 1193278
Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| |||||||| ||||| || || ||||| ||||||||
Sbjct 1193277 ATGGTTTTACCGGTAAGGGTCTTTACGAAGATTTGCAT 1193240
Score = 100 bits (110), Expect = 2e-15
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| || | |||||||| ||| ||||| || ||||| || | ||| ||||
Sbjct 1193685 AGACGGAGGACCAAGTGAAGGGTCGATTCCTTTTGG--ATGTTGTAGTCGGATAGGGTTC 1193628
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
| ||| ||||| || || ||||||||||| | || |||||||| || ||||| || |
Sbjct 1193627 GTCCATCCTCAAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGATCTGGGGGAATGCCCT 1193568
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434
| || || ||||| || || || |||||| ||||||| | | || ||||
Sbjct 1193567 CCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTATCAGAAGGTTCAACCTCCAGAG 1193508
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| | ||||| || || | || || ||||| |||||||||
Sbjct 1193507 TGATGGTTTTTCCGGTTAAGGTCTTCACGAAGATTTGCATA 1193467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029008889995210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |