Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq5079 96.9 6e-15 seq5080 95.1 2e-14 >seq5079 Length=1084440 Score = 96.9 bits (106), Expect = 6e-15 Identities = 70/80 (88%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 16118 GAATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTA 16177 |||||||||||||| | ||||||||||| | |||| | ||||||||||||| ||||||| Sbjct 782266 GAATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTA 782325 Query 16178 TCC-ACTGAGCTAAGAGCGC 16196 ||| ||||||||||| |||| Sbjct 782326 TCCAACTGAGCTAAGGGCGC 782345 >seq5080 Length=249237 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 ||||||||||||| | ||||||||||| | |||| | ||||||||||||| |||||||| Sbjct 80077 AATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTAT 80018 Query 16179 CC-ACTGAGCTAAGAGCGC 16196 || ||||||||||| |||| Sbjct 80017 CCAACTGAGCTAAGGGCGC 79999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911032570856280