Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_016571.1
Length=284757
Score E
Sequences producing significant alignments: (Bits) Value
seq5079 96.9 6e-15
seq5080 95.1 2e-14
>seq5079
Length=1084440
Score = 96.9 bits (106), Expect = 6e-15
Identities = 70/80 (88%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 16118 GAATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTA 16177
|||||||||||||| | ||||||||||| | |||| | ||||||||||||| |||||||
Sbjct 782266 GAATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTA 782325
Query 16178 TCC-ACTGAGCTAAGAGCGC 16196
||| ||||||||||| ||||
Sbjct 782326 TCCAACTGAGCTAAGGGCGC 782345
>seq5080
Length=249237
Score = 95.1 bits (104), Expect = 2e-14
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178
||||||||||||| | ||||||||||| | |||| | ||||||||||||| ||||||||
Sbjct 80077 AATGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTAT 80018
Query 16179 CC-ACTGAGCTAAGAGCGC 16196
|| ||||||||||| ||||
Sbjct 80017 CCAACTGAGCTAAGGGCGC 79999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 911032570856280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |