Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_018283.1
Length=58065
Score E
Sequences producing significant alignments: (Bits) Value
seq5077 242 1e-59
>seq5077
Length=233700
Score = 242 bits (268), Expect = 1e-59
Identities = 617/925 (67%), Gaps = 23/925 (2%)
Strand=Plus/Minus
Query 15339 TTTGGGCAAGGCCGTCCAATGGTGGCGCAAACCATGTCCCAAATAATGCAGCCG-TCCAC 15397
||||||||||| | ||||| || ||||||||||| ||||| | | ||| || |||||
Sbjct 96437 TTTGGGCAAGGTCTACCAATTGTCGCGCAAACCATATCCCACAACA-GCACCCCATCCAC 96379
Query 15398 CAGTTCTTGCCGTGTAATGATCTCGGTGGAAAGGCGCGTGTGGATACCCGACCATGCGTT 15457
| | | ||| | ||| || || | | ||| || ||||| || |||||||| |||||
Sbjct 96378 TCGCTGGTTCCGCGCAATCATTTCAGCGCTAAGACGTGTGTGAATGCCCGACCAAGCGTT 96319
Query 15458 ATGCCTCGGGTCTGCGCCGGGATTCGTGCAGACGCTCCAAACGATGAATTCATTTGCATT 15517
| || ||||| || ||||| | |||| ||||| | | || |||| ||
Sbjct 96318 TCGTTGAGGATCTGCACCAGGATTGGAACAGATACTCCAGATCACAAACTCATCAGCGAG 96259
Query 15518 CGCCGGACGCTGAAAGATGTTCGTGTTGTTGCCATCCAAGCAACCCTTTAGCTCGATGAC 15577
| ||| || | ||| || |||||||| || ||||| | || ||||| || || || ||
Sbjct 96258 TGGCGGTCGTTCAAAAATATTCGTGTTATTCCCATCAAGACAGCCCTTAAGGTCAATAAC 96199
Query 15578 AGCGACACGATCTG-ATGGAAGCGTCACGGAATAATCGTGCCGGTTGGC-TTCGCCGGAT 15635
||| ||||| | || | || || |||||| | ||||| || || | |
Sbjct 96198 AGCAACACGTCCACTATTTAGACGA-ACAATATAATCATTACGGTTTGCATTATCTGTCA 96140
Query 15636 GACTCCCACTCTTTGATGAAGTGGTTATCCTGCATATAGTTTAGGACGCGCTGAACAAAC 15695
|| ||||| | || || | || | ||||| || || | |||||||||||
Sbjct 96139 GA-TCCCATCCAGCAATAAAACCGCCGTCTTCCATATGATTCAGCGCATGCTGAACAAAC 96081
Query 15696 TCCCGCTTCTCACGCATGGTAGCTGAGAACTGGCCGCGAATGCGTTCGATAGCGCCCCGA 15755
|| || || ||||||| || || || |||||||| || | || || || ||||| |||
Sbjct 96080 TCTCGTTTGCCACGCATAGTGGCCGAAAACTGGCCACGGACACGCTCTATCGCGCCACGA 96021
Query 15756 AACACGCCACTATTATAGAATTC-CGCTTCGCCTAAGCCGTGAAGGCCGAGCTTATGGCC 15814
|||| ||| | |||||| || ||| || | || || || ||| || ||||| |
Sbjct 96020 AACAAACCAGACTGATAGAACTCTCGC-TCATCCAAACCATGGTCGCCAAGTTTATGCGC 95962
Query 15815 TTCAGCCTTCAGCACATCTGAATACTCTTCGATCTTTTTCCGCAATTCAGCGTTCTGCTC 15874
||| | || || | || | | || ||||| | | |||||| | |||||| |
Sbjct 95961 TTCTGTTTTAAGTATTTCAGCAAACCTCTCGATTTGATCGCGCAATCCCTTGTTCTGTTT 95902
Query 15875 GCACGGAATGATATTCATGCGGCGACCT-TTGCCGACGTTGGA----CTTCCAAGAATTC 15929
|| ||||| || |||||| || ||| || || | | ||| | ||||| |
Sbjct 95901 ACAGGGAATAATGGTCATGCCGCTTCCTGTTTCC--CTTCGGAAACCATGCCAAGTAACG 95844
Query 15930 GCTCAAAAAGATGATGAGCCAAATGGCGGACTACGGGAACGACCACACCATCGCCGGTCA 15989
| || | | ||| || |||| ||| || || || || || | || ||||| || ||||
Sbjct 95843 GTTCCAGGATATGCTGCGCCAGATGACGAACGACAGGCACAGCTACGCCATCCCCTGTCA 95784
Query 15990 GGTGGTACGCCTCGTTGTAGTTCTCAGGGAGCTTGTAATCGTCAGGCAAGCCCATGAGGC 16049
|||| || || || || || |||| ||| |||||||||| || | ||||| || |
Sbjct 95783 GGTGATAAGCTTCATTATAATTCTTAGGCAGCTTGTAATGATCTCCGAGCCCCATCAGCC 95724
Query 16050 GCGCCGTTTCGCGACTAGATATCAGGCGAGAGCGAACCTTGTCACGTTGCACAACTAAGA 16109
|| ||||| ||| | || || || || || |||||||| | | ||||| | |
Sbjct 95723 TTGCTGTTTCACGAGTGGAGATTAGCCGCGACCGAACCTTCCGGCCGTCAACAACAATAA 95664
Query 16110 TTGACTGCCGACTTGAACCGCCAGCCGGAGTGCGGAGACAACCCGAGATATCATCAAATC 16169
||| ||| || |||||||| || ||||| || || |||||||| | |||||| ||||| |
Sbjct 95663 TTGTCTGACGGCTTGAACCCCCTGCCGGCGTCCGAAGACAACCTGCGATATCGTCAAACC 95604
Query 16170 GAATTTCCGCGCGCTGCACCTT----GCGTTTGAATTCGTCGAGACGTGTGCGCTTGTAA 16225
| | ||| || ||||| || || |||| ||| || |||||||| || | ||
Sbjct 95603 GCACTTCAGCACGCTGAACTTTCGCCCCGTT----TTCATCAAGACGTGTTCGTCTATAG 95548
Query 16226 ATTCCGCCAACCATGCGCTTGGCCG 16250
|| | || ||||| ||| || |||
Sbjct 95547 ATGGCTCCCACCATACGCCTGCCCG 95523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185674428913846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |