Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq5242 111 2e-19 >seq5242 Length=5320397 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 || ||||| || || || | || |||||||| |||| | ||| || ||| |||| Sbjct 5299056 TAGCAGGCAAGCAAAAATCCACCATAGGTTCCAGTTCGCCGGCCCTTTCCCTTGTAGCCG 5299115 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 ||||| || |||| ||||| | ||||| ||| |||||||| ||||| ||||| Sbjct 5299116 CCGATCACAACCAAGTCCAGTGAGTCGCCCACATTGGATATGTAATCCTTCTTTAGTTTC 5299175 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 ||||| |||| |||| |||||||||||| ||||| || | | ||||| ||||| | | Sbjct 5299176 AGCCAATTTCTGGATCGCTTGGCAATCTCATAGGTGGCCTCCTCATCCAGTGTCTTCACC 5299235 Query 197269 ATCAATCCCTCGCA 197282 || | |||||||| Sbjct 5299236 ATAAGACCCTCGCA 5299249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676683675437520