Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq5079 87.8 3e-12
seq4704 87.8 3e-12
seq4161 87.8 3e-12
seq30 84.2 4e-11
>seq5079
Length=1084440
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||| || |||||||||
Sbjct 806934 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAAT 806993
Query 133023 CCCTCCCCCGCATCCA 133038
|| |||||||| |||
Sbjct 806994 CCTGCCCCCGCAACCA 807009
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||| || |||||||||
Sbjct 1002477 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAAT 1002536
Query 133023 CCCTCCCCCGCATCCA 133038
|| |||||||| |||
Sbjct 1002537 CCTGCCCCCGCAACCA 1002552
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 270 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 329
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 330 CCTATCCCCGCAACCA 345
>seq4704
Length=42152
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||| || |||||||||
Sbjct 40101 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAAT 40042
Query 133023 CCCTCCCCCGCATCCA 133038
|| |||||||| |||
Sbjct 40041 CCTGCCCCCGCAACCA 40026
>seq4161
Length=32127
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||| || |||||||||
Sbjct 31864 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAAT 31805
Query 133023 CCCTCCCCCGCATCCA 133038
|| |||||||| |||
Sbjct 31804 CCTGCCCCCGCAACCA 31789
>seq30
Length=443100
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 154591 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 154650
Query 133023 CCCTCCCCCGCATCCACAA 133041
|| ||||||| ||| ||
Sbjct 154651 CCTATCCCCGCAACCAAAA 154669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895705611052680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |