Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq5080 86.0 9e-12 seq5079 86.0 9e-12 >seq5080 Length=249237 Score = 86.0 bits (94), Expect = 9e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 198613 GCGCTGTTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCACTGGTTCGAA 198672 |||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||| Sbjct 79999 GCGCCCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGCTGGTTCGAA 80058 Query 198673 TCCAGTACGGCGCACCA 198689 ||||| | ||||| ||| Sbjct 80059 TCCAGCAGGGCGCGCCA 80075 >seq5079 Length=1084440 Score = 86.0 bits (94), Expect = 9e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 198613 GCGCTGTTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCACTGGTTCGAA 198672 |||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||| Sbjct 782345 GCGCCCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGCTGGTTCGAA 782286 Query 198673 TCCAGTACGGCGCACCA 198689 ||||| | ||||| ||| Sbjct 782285 TCCAGCAGGGCGCGCCA 782269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741399283376520