Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq5078 100 4e-16 seq4424 100 4e-16 >seq5078 Length=1488007 Score = 100 bits (110), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct 1125981 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 1126039 Query 169792 GTCAGTCCTGCCATTTT 169808 |||| || |||| ||| Sbjct 1126040 GTCACTCGCGCCACTTT 1126056 >seq4424 Length=98381 Score = 100 bits (110), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct 55363 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 55305 Query 169792 GTCAGTCCTGCCATTTT 169808 |||| || |||| ||| Sbjct 55304 GTCACTCGCGCCACTTT 55288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777579227948400