Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq5277 84.2 2e-11 >seq5277 Length=7425378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| || | || ||||||||||| || || |||||||| Sbjct 1193240 ATGCAAATCTTCGTAAAGACCCTTACCGGTAAAACCATCACTCTGGAGGTTGAACCTTCT 1193299 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||| ||||| ||||| |||||| | || |||||| Sbjct 1193300 GATACCATTGAGAACGTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGATCAG 1193359 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || ||||| || || ||||| ||||||||| | ||| | |||| || ||| Sbjct 1193360 CAGCGTCTCATCTTCGCAGGAAAACAGTTGGAAGATGGTCGCACTCTTTCCGACTACAAC 1193419 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || || || || ||||| || ||| |||| Sbjct 1193420 ATCCAGAAGGAGTCTACCCTTCACTTGGT 1193448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425376652692591