Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_021221.1 Length=45781 Score E Sequences producing significant alignments: (Bits) Value seq4674 80.6 8e-11 >seq4674 Length=694708 Score = 80.6 bits (88), Expect = 8e-11 Identities = 137/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1117 GACCGACCTGTCCTTCGAGTTCCCGAAGGGGGTCTATGGGCGTCTCGCTCCTCGTTCGGG 1176 |||||||||| | || | ||| |||| ||| || || | ||||| || || || Sbjct 524037 GACCGACCTGCAGGTGCAGGTTCCGGAGGGCTCCTACGGCCGCGTTGCTCCACGCTCTGG 523978 Query 1177 GCTGGCGGTGAAACACTTTATCGATGTGGGGGCGGGCGTGATAGACGGCGACTATCGAGG 1236 ||||| ||||| |||| ||||||||||| || |||||| | |||| || || || || Sbjct 523977 ACTGGCCGTGAAGAACTTCATCGATGTGGGCGCCGGCGTGGTGGACGAGGATTACCGCGG 523918 Query 1237 CATCGTGTGCGTGCTGCTGTTTAATTTCTCAGACAGCGATTACCACGTGCGGTGCGGCGA 1296 || | | |||| |||| || ||| ||| ||| || | | | ||| | ||||||| Sbjct 523917 CAACCTCGGCGTCGTGCTCTTCAATCACTCGGACGTGGACTTCGAGGTGAAGCGCGGCGA 523858 Query 1297 TAGGGTCGTGCAATTGATT 1315 | | ||| || || ||| Sbjct 523857 TCGCATCGCCCAGTTCATT 523839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146368163127614