Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_021304.1
Length=51552
Score E
Sequences producing significant alignments: (Bits) Value
seq4311 109 2e-19
>seq4311
Length=289319
Score = 109 bits (120), Expect = 2e-19
Identities = 219/323 (68%), Gaps = 4/323 (1%)
Strand=Plus/Plus
Query 40706 TCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGAT 40765
|||| |||| |||||||| || ||| |||||||| | || || || ||
Sbjct 204773 TCCGAACGTGATAATCTGCGCCACACGGTCCGCCCCGTATTCACGCCGCACATAGGCTAT 204832
Query 40766 CACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGC 40823
||||||| | || || || | || ||||||||| || | || ||||||||||| ||
Sbjct 204833 CACCTCGTCTCGCCGGTCCTGACA--GAAGTCGATATCAAAGTCAGGCATGGACACACGT 204890
Query 40824 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40883
|| || ||||| ||||| ||||| | || | | |||||| || | || |||||
Sbjct 204891 TCAGGATTCAGAAACCGTTCGAACAGCAGATTGAACGGCAGCGGATCAATATCTGTGATG 204950
Query 40884 CCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACG 40943
| | | ||| |||| ||||| || | || || ||||| || || ||| ||
Sbjct 204951 GTCAACGCCCATGCGGCCAGAGAACCTGCACCCGACCCACGCCCCGGCCCCACCGGGATA 205010
Query 40944 CCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCC 41003
| | | ||||| |||| ||||||||||||| |||| | |||||| |||||||||
Sbjct 205011 TCATGCGCCTTCCCCCACTGGATGAAGTCCGCAACGATCATGAAGTAACCGGGGAAGCCC 205070
Query 41004 ATCTGGATGATCATGTCGATCTC 41026
|||| | ||| || || | |||
Sbjct 205071 ATCTTGGAGATAATATCCAGCTC 205093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164834172558772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |