Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq4311 95.1 4e-15
>seq4311
Length=289319
Score = 95.1 bits (104), Expect = 4e-15
Identities = 216/323 (67%), Gaps = 4/323 (1%)
Strand=Plus/Plus
Query 40166 TCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGAT 40225
|||| |||| |||||||| || ||| |||||||| | || || || ||
Sbjct 204773 TCCGAACGTGATAATCTGCGCCACACGGTCCGCCCCGTATTCACGCCGCACATAGGCTAT 204832
Query 40226 GACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGC 40283
|||||| | || || || | || ||||||||| || | || ||||||||||| ||
Sbjct 204833 CACCTCGTCTCGCCGGTCCTGACA--GAAGTCGATATCAAAGTCAGGCATGGACACACGT 204890
Query 40284 TCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40343
|| || ||||| || || ||||| | || | | |||||| || | || |||||
Sbjct 204891 TCAGGATTCAGAAACCGTTCGAACAGCAGATTGAACGGCAGCGGATCAATATCTGTGATG 204950
Query 40344 CCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACC 40403
| | | ||| |||| ||||| || | || || ||||| || || ||| ||
Sbjct 204951 GTCAACGCCCATGCGGCCAGAGAACCTGCACCCGACCCACGCCCCGGCCCCACCGGGATA 205010
Query 40404 CCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCC 40463
| | | ||||| |||| ||||||||||||| |||| | |||||| ||||| |||
Sbjct 205011 TCATGCGCCTTCCCCCACTGGATGAAGTCCGCAACGATCATGAAGTAACCGGGGAAGCCC 205070
Query 40464 ATCTGGATGATCATGTCGATCTC 40486
|||| | ||| || || | |||
Sbjct 205071 ATCTTGGAGATAATATCCAGCTC 205093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163314270552222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |