Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_021532.1 Length=103910 Score E Sequences producing significant alignments: (Bits) Value seq5078 91.5 1e-13 >seq5078 Length=1488007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 86821 CGTACTGCGGTATGCTGTCTGTCTTCAGTGAATCTAGGCAAATACGATGAGTGGAAAGAC 86880 ||||| || ||||||||||| ||||| ||||||| | | || ||||||||||| || Sbjct 248833 CGTACGGCTGTATGCTGTCTTTCTTCCCTGAATCTGGAAACATGGGATGAGTGGAAGGAT 248774 Query 86881 GACAAGTTGTTTATTGGCGACCTTATTGAGATGCTAGATAACGTACTAGAGTATTTCATA 86940 || | |||||||| ||| | || | | || |||||||| || || | ||||| Sbjct 248773 AACCCGCAGTTTATTGAGGACGTGATGCTGTTCCTTGATAACGTGCTGCAGGACTTCATC 248714 Query 86941 GAAAATGCCCCGGCCCCTCTGGCCAGAGCAAAATACTCTGCCATGCGCGAGCGTTCTCTT 87000 || ||| || | | || | | || ||||| | |||||||| || || ||| || Sbjct 248713 GACCGTGCGCCAGAAGATATGCACCGCGCCAAATATGCGGCCATGCGTGAACGCTCTGTT 248654 Query 87001 GGCCTAGGTGCCATGGGTTTCCA 87023 || || |||| ||||| ||||| Sbjct 248653 GGGCTTGGTGTTATGGGCTTCCA 248631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 332365207289299