Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_021532.1
Length=103910
Score E
Sequences producing significant alignments: (Bits) Value
seq5078 91.5 1e-13
>seq5078
Length=1488007
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 86821 CGTACTGCGGTATGCTGTCTGTCTTCAGTGAATCTAGGCAAATACGATGAGTGGAAAGAC 86880
||||| || ||||||||||| ||||| ||||||| | | || ||||||||||| ||
Sbjct 248833 CGTACGGCTGTATGCTGTCTTTCTTCCCTGAATCTGGAAACATGGGATGAGTGGAAGGAT 248774
Query 86881 GACAAGTTGTTTATTGGCGACCTTATTGAGATGCTAGATAACGTACTAGAGTATTTCATA 86940
|| | |||||||| ||| | || | | || |||||||| || || | |||||
Sbjct 248773 AACCCGCAGTTTATTGAGGACGTGATGCTGTTCCTTGATAACGTGCTGCAGGACTTCATC 248714
Query 86941 GAAAATGCCCCGGCCCCTCTGGCCAGAGCAAAATACTCTGCCATGCGCGAGCGTTCTCTT 87000
|| ||| || | | || | | || ||||| | |||||||| || || ||| ||
Sbjct 248713 GACCGTGCGCCAGAAGATATGCACCGCGCCAAATATGCGGCCATGCGTGAACGCTCTGTT 248654
Query 87001 GGCCTAGGTGCCATGGGTTTCCA 87023
|| || |||| ||||| |||||
Sbjct 248653 GGGCTTGGTGTTATGGGCTTCCA 248631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 332365207289299
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |