Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq5080 86.0 3e-12 seq5079 84.2 1e-11 >seq5080 Length=249237 Score = 86.0 bits (94), Expect = 3e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 68156 AAGCATCCTTAGCTCAGCAGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCG 68215 |||| ||||||||||| |||||||||| ||||||||||||| | |||| |||||||| Sbjct 79997 AAGCGCCCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGCTGGTTCG 80056 Query 68216 AATCCAGTAGGG 68227 ||||||| |||| Sbjct 80057 AATCCAGCAGGG 80068 >seq5079 Length=1084440 Score = 84.2 bits (92), Expect = 1e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 68162 CCTTAGCTCAGCAGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 68221 ||||||||||| |||||||||| ||||||||||||| | |||| |||||||||||||| Sbjct 782341 CCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGCTGGTTCGAATCCA 782282 Query 68222 GTAGGG 68227 | |||| Sbjct 782281 GCAGGG 782276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231520680203495