Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq5214 136 3e-27
seq4488 134 9e-27
seq5277 125 5e-24
seq4172 123 2e-23
>seq5214
Length=3698012
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||| ||||||||||||||||||||| || ||| |||| ||||
Sbjct 3523180 CAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATC 3523121
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || ||||||||||| || ||||| ||| | || | || || |||||
Sbjct 3523120 TTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC 3523061
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || ||| || | | || | || | ||||| |||| || |||||
Sbjct 3523060 CTGAATCTTGGCTTTAACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGT 3523001
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| |||||||||||||| || |||||||||||
Sbjct 3523000 CTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 3522968
>seq4488
Length=533506
Score = 134 bits (148), Expect = 9e-27
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| || | ||| ||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 135516 AGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCATCC 135457
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 135456 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 135397
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 135396 TGAATCTTAGCCTTCAC--ATTCTCGATGGTGTCGGAAGGCTCCACCTCCAAGGTGATGG 135339
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || |||||||| || |||||||||||||||
Sbjct 135338 TCTTGCCGGTGAGGGTTTTCACAAAGATCTGCATG 135304
>seq5277
Length=7425378
Score = 125 bits (138), Expect = 5e-24
Identities = 158/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 1193907 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCC 1193848
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| || || || || || || ||||| ||| | || | |||||||||||
Sbjct 1193847 TCCAGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 1193788
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| || || || || || | ||| || ||| || |||| ||| ||||
Sbjct 1193787 TGAATTTTGGCCTTTAC--ATTCTCAATGGTATCAGAGGGCTCAACTTCAAGGGTGATGG 1193730
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 1193729 TCTTGCCAGTTAAGGTCTTCACGAAGATCTGCATG 1193695
Score = 114 bits (126), Expect = 8e-21
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| |||| || ||||||||||| || || || || | || ||||
Sbjct 1192995 AGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCGGAAAGAGTACGGCCATCT 1192936
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||||||||| ||||| ||| | || | |||||||||||
Sbjct 1192935 TCAAGCTGCTTGCCGGCAAAGATCAGTCGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 1192876
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || |||| || | |||||| || | || ||||
Sbjct 1192875 TGAATCTTGGCCTTCAC--ATTCTCAATCGTATCGGAAGGCTCGACCTCCAAAGTAATGG 1192818
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || | |||||| ||||||||||||||
Sbjct 1192817 TCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1192784
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 1193451 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCT 1193392
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| || ||||| |||||||| || || ||||| ||| | || | |||||||||||
Sbjct 1193391 TCCAACTGTTTTCCTGCGAAGATGAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCC 1193332
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | || | ||| | || || || | || |||||
Sbjct 1193331 TGAATTTTAGCCTTCACGTTCTCAATGGTATCAGAAGGTTCAACCTCCAGAGTGATGGTT 1193272
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || ||||||||||| ||||| ||||||
Sbjct 1193271 TTACCGGTAAGGGTCTTTACGAAGATTTGCATG 1193239
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | ||| ||| ||||| ||||| |||||||| | | | || |||| |||
Sbjct 1194132 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCCGACAAGGTACGGCCATCCTCC 1194073
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|||||||| || ||||| || || || ||||| ||| | || | ||||| ||||| |
Sbjct 1194072 AGTTGCTTACCAGCGAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCCTGG 1194013
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|| || || ||| | || | ||| || ||| || || | |||||||| ||
Sbjct 1194012 ATCTTGGCCTTCACGTTCTCAATGGTATCAGAGGGCTCAACCTCCAGAGTTATGGTTTTA 1193953
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || |||||||| || ||||| ||||||
Sbjct 1193952 CCGGTCAGGGTCTTCACGAAGATTTGCATG 1193923
Score = 104 bits (114), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| |||||||| ||||| || || || || |||| | ||
Sbjct 1194363 AGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCC 1194304
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| ||||| ||||||| || ||||||||| | || | |||||||||||
Sbjct 1194303 TCCAACTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCC 1194244
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| || || || || || | ||| | ||| || || | || ||||
Sbjct 1194243 TGGATTTTAGCCTTCAC--ATTCTCAATGGTGTCAGATGGCTCCACCTCCAGTGTAATGG 1194186
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || |||||||| || ||||| ||||||
Sbjct 1194185 TCTTGCCAGTTAGGGTCTTCACGAAGATTTGCATG 1194151
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||||| || ||||| ||||| |||||| | || ||||
Sbjct 1193679 AGGACCAAGTGAAGGGTCGATTCCTTTTGGATGTTGTAGTCGGATAGGGTTCGTCCATCC 1193620
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| || |||| ||| ||||| ||| | || | |||||||||||
Sbjct 1193619 TCAAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 1193560
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | ||| | || || || | || ||||
Sbjct 1193559 TGAATCTTGGCCTTCAC--ATTCTCAATGGTATCAGAAGGTTCAACCTCCAGAGTGATGG 1193502
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| ||||| || | |||||| || ||||| |||||
Sbjct 1193501 TTTTTCCGGTTAAGGTCTTCACGAAGATTTGCAT 1193468
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || ||||| | | || |||| ||||||||||| || || ||
Sbjct 1193203 CTCCTTCTGGATGTTGTAATCCGACAACGTACGGCCATCCTCCAGTTGCTTACCAGCAAA 1193144
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || || ||||| ||| | || | || |||||||| | || || || |||
Sbjct 1193143 AATGAGACGCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 1193084
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| | || || || | || |||||||| ||||| |||||||| ||
Sbjct 1193083 CTCAATGGTATCAGAAGGTTCAACCTCCAGAGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1193024
Query 34966 AAAGATCTGCATG 34978
||||||||||||
Sbjct 1193023 GAAGATCTGCATG 1193011
>seq4172
Length=1033301
Score = 123 bits (136), Expect = 2e-23
Identities = 158/216 (73%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||| || | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 906754 CAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATC 906813
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||||||||||||||||| || ||||| ||| | || | || ||||||||
Sbjct 906814 CTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCTTCCTTGTC 906873
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | || | |||||| || | || |||
Sbjct 906874 CTGGATCTTGGCCTTCAC--ATTCTCGATGGTATCGGAAGGCTCGACCTCCAAAGTGATG 906931
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || ||||| ||||| |||||||||||||||
Sbjct 906932 GTCTTGCCTGTGAGAGTCTTGACAAAGATCTGCATG 906967
Score = 104 bits (114), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| |||||||| || || | | | || |||| ||||| ||||||||||||||
Sbjct 907231 CTCCTTCTGGATGTTATAATCGGACAAGGTACGTCCATCTTCCAGCTGCTTTCCGGCGAA 907290
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || ||||| ||| | || | ||||||||||| | || || || || |
Sbjct 907291 GATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC--A 907348
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | || | ||| || || | || |||||||| || || || |||||
Sbjct 907349 TTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCAGTCAGAGTCTTC 907408
Query 34964 ACAAAGATCTGCATG 34978
|| ||||||||||||
Sbjct 907409 ACGAAGATCTGCATG 907423
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | || | ||| |||| || | ||| |||||| || ||||| ||||| ||
Sbjct 906968 CCTCCACGCAGACGCAGAACCAAATGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 907027
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| |||||||||||||| |||| || ||||| ||| | ||
Sbjct 907028 AGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGATCTGGGGGG 907087
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || || ||| | || | || | ||| ||
Sbjct 907088 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACC 907147
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || |||||||| || || | ||||| || ||||||||||||
Sbjct 907148 TCCAAAGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCATG 907195
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | || | |||||||| ||||| ||| |||||||| |||||||| || ||
Sbjct 907424 CCTCCACGCAGACGCAGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTATAATCGGAC 907483
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | || | || ||||| |||||||||||||| |||| || ||||| ||| | ||
Sbjct 907484 AAAGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGATCTGGGGGA 907543
Query 34871 ACCCCCTCCTTGTC 34884
| |||||||||||
Sbjct 907544 ATTCCCTCCTTGTC 907557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325671250230551
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