Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04] 5,429 sequences; 171,267,669 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq601 89.7 4e-12 >seq601 Length=1931879 Score = 89.7 bits (98), Expect = 4e-12 Identities = 443/703 (63%), Gaps = 2/703 (0%) Strand=Plus/Plus Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 || || ||||| || || ||||| |||||||||| | || | ||| | || | | Sbjct 902798 GTGACTAGACGGTTGTCGAAATCCTCACCTCCCAGATGGGTGTCTCCGGCAGTGGACTTG 902857 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 || | ||| | ||||| || | |||| | | ||||| ||| || ||||||| | Sbjct 902858 ACCTCGAAGATACCATCATCGATCGACAGGATGGACACATCGAAGGTGCCGCCACCCAGA 902917 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || || || || || || ||| | || || || ||||| || || | ||| Sbjct 902918 TCGAAGATGAGCACGTTGCGCTCTCCAACGGCCTTCTTGTCCAGACCGTAAGCGATGGCA 902977 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || || || || || || || || | || ||||| ||||| ||||| | || || || Sbjct 902978 GCGGCCGTGGGCTCGTTGATGATGCGCAGCACATTCAGACCGGCAATGGTACCGGCGTCC 903037 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || || || | || || ||||| || || || || || || || || || | || Sbjct 903038 TTGGTCGCCTGACGCTGCGAGTCGTTGAAGTAGGCCGGCACGGTGATGACAGCGTTGGTC 903097 Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538 || || || | ||| || || || | ||||| || | | | ||| || || Sbjct 903098 ACAGTCTTGCCCAGATAGGCCTCGGCGGTCTCCTTCATCTTGGTGAGCACCATCGAGGAG 903157 Query 282539 ATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 282597 || | || || ||| | | ||| || | | || | || || | | || || Sbjct 903158 ATCTCCTCGGG-GAAGAAGGTCTTCTTCTCGTCCTTGTAGGTCACCTCGATCTTGGGCTT 903216 Query 282598 ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTC 282657 || | | | || | || ||||| | ||||| || || || ||| ||| Sbjct 903217 GCCGTCAGCGCTGACCACCTCGAAGGGCCAGTGCTTCATGTCAGACTGGACAGCGGAGTC 903276 Query 282658 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGC 282717 | || | | ||||| | || || || || || || || | ||| || || | || Sbjct 903277 CTCGAACTTGCGGCCAATCAGGCGCTTGGCGTCGAAGATCGTCTGGGTCGGGTTCATCGC 903336 Query 282718 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 282777 | || | ||||| || || || |||||| | || || || || || | |||||| || Sbjct 903337 CACCTGGTTCTTGGCGGCGTCGCCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGA 903396 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 282837 |||||| || |||||||| || || || || || || || || || |||| || | || Sbjct 903397 TGGAGTGGTACGATTACCCTGGTCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACAC 903456 Query 282838 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 || || || | || || || ||||||||||||| |||| Sbjct 903457 GCCCACGCACGAGTAGGTGGTGCCCAAATCAATACCAACAGCA 903499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740363859042954