Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20elegans_20[refseq_20GCF_5F000224195.1_202013-03-04]
5,429 sequences; 171,267,669 total letters
Query= NC_023688.1
Length=222006
Score E
Sequences producing significant alignments: (Bits) Value
seq4667 84.2 3e-11
seq4241 84.2 3e-11
seq2039 84.2 3e-11
seq30 84.2 3e-11
>seq4667
Length=397774
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 6956 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 7015
Query 94961 GAACGG 94966
||||||
Sbjct 7016 GAACGG 7021
>seq4241
Length=507456
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 399 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 458
Query 94961 GAACGG 94966
||||||
Sbjct 459 GAACGG 464
>seq2039
Length=36938
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 32172 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 32231
Query 94961 GAACGG 94966
||||||
Sbjct 32232 GAACGG 32237
>seq30
Length=443100
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 222890 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 222949
Query 94961 GAACGG 94966
||||||
Sbjct 222950 GAACGG 222955
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 366812 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 366871
Query 94961 GAACGG 94966
||||||
Sbjct 366872 GAACGG 366877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710242997863440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |